Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.49□□□□□ -1.85
RARAP10276 Pinc.1-201ENST00000616452 154 ntBASIC3.49□□□□□ -1.85
RARAP10276 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.49□□□□□ -1.85
RARAP10276 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RARAP10276 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.49□□□□□ -1.85
RARAP10276 MIR1248-201ENST00000629190 106 ntBASIC3.49□□□□□ -1.85
RARAP10276 AC091564.4-201ENST00000533934 2194 ntBASIC3.49□□□□□ -1.85
RARAP10276 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RARAP10276 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RARAP10276 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.49□□□□□ -1.85
RARAP10276 AL049781.1-201ENST00000623195 3585 ntBASIC3.48□□□□□ -1.85
RARAP10276 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RARAP10276 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RARAP10276 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
RARAP10276 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RARAP10276 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
RARAP10276 Y_RNA.500-201ENST00000384466 111 ntBASIC3.48□□□□□ -1.85
RARAP10276 MIR891A-201ENST00000401237 79 ntBASIC3.48□□□□□ -1.85
RARAP10276 RNA5SP127-201ENST00000411051 133 ntBASIC3.48□□□□□ -1.85
RARAP10276 HMGN2P18-201ENST00000450680 270 ntBASIC3.48□□□□□ -1.85
RARAP10276 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.48□□□□□ -1.85
RARAP10276 OR9P1P-201ENST00000496431 281 ntBASIC3.48□□□□□ -1.85
RARAP10276 RNU6-126P-201ENST00000516685 103 ntBASIC3.48□□□□□ -1.85
RARAP10276 RNU6-965P-201ENST00000516721 96 ntBASIC3.48□□□□□ -1.85
RARAP10276 SCARNA20.6-201ENST00000517251 106 ntBASIC3.48□□□□□ -1.85
RARAP10276 AC007751.1-201ENST00000529260 376 ntBASIC3.48□□□□□ -1.85
RARAP10276 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.48□□□□□ -1.85
RARAP10276 MIR4662B-201ENST00000579498 81 ntBASIC3.48□□□□□ -1.85
RARAP10276 AL365205.2-201ENST00000594586 68 ntBASIC3.48□□□□□ -1.85
RARAP10276 AC007179.3-201ENST00000604976 235 ntBASIC3.48□□□□□ -1.85
RARAP10276 MIR6715A-201ENST00000615929 79 ntBASIC3.48□□□□□ -1.85
RARAP10276 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
RARAP10276 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RARAP10276 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
RARAP10276 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RARAP10276 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RARAP10276 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RARAP10276 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
RARAP10276 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.47□□□□□ -1.85
RARAP10276 Y_RNA.66-201ENST00000362862 102 ntBASIC3.47□□□□□ -1.85
RARAP10276 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
RARAP10276 RNU6-880P-201ENST00000384526 107 ntBASIC3.47□□□□□ -1.85
RARAP10276 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
RARAP10276 AC092185.1-201ENST00000491371 97 ntBASIC3.47□□□□□ -1.85
RARAP10276 AC093663.1-201ENST00000497190 394 ntBASIC3.47□□□□□ -1.85
RARAP10276 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.47□□□□□ -1.85
RARAP10276 RNU1-143P-201ENST00000516296 146 ntBASIC3.47□□□□□ -1.85
RARAP10276 AL022345.2-201ENST00000606307 135 ntBASIC3.47□□□□□ -1.85
RARAP10276 SNORA51-201ENST00000606420 132 ntBASIC3.47□□□□□ -1.85
RARAP10276 U1.23-201ENST00000610293 146 ntBASIC3.47□□□□□ -1.85
RARAP10276 RNU1-68P-201ENST00000615382 146 ntBASIC3.47□□□□□ -1.85
RARAP10276 U1.39-201ENST00000621562 146 ntBASIC3.47□□□□□ -1.85
RARAP10276 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.47□□□□□ -1.85
RARAP10276 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.47□□□□□ -1.85
RARAP10276 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RARAP10276 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RARAP10276 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
RARAP10276 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RARAP10276 AC008555.8-201ENST00000623602 2168 ntBASIC3.46□□□□□ -1.85
RARAP10276 AL136360.1-201ENST00000503377 1900 ntBASIC3.46□□□□□ -1.85
RARAP10276 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RARAP10276 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
RARAP10276 Y_RNA.346-201ENST00000365385 112 ntBASIC3.46□□□□□ -1.86
RARAP10276 Y_RNA.486-201ENST00000384398 107 ntBASIC3.46□□□□□ -1.86
RARAP10276 MIR490-201ENST00000384865 128 ntBASIC3.46□□□□□ -1.86
RARAP10276 RNA5SP490-201ENST00000517141 136 ntBASIC3.46□□□□□ -1.86
RARAP10276 SCARNA11.3-201ENST00000517276 130 ntBASIC3.46□□□□□ -1.86
RARAP10276 RNU1-104P-201ENST00000517280 175 ntBASIC3.46□□□□□ -1.86
RARAP10276 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.46□□□□□ -1.86
RARAP10276 AC025166.1-201ENST00000612411 163 ntBASIC3.46□□□□□ -1.86
RARAP10276 UCA1.1-201ENST00000620952 75 ntBASIC3.46□□□□□ -1.86
RARAP10276 AC110079.1-202ENST00000635213 138 ntBASIC3.46□□□□□ -1.86
RARAP10276 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RARAP10276 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RARAP10276 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.46□□□□□ -1.86
RARAP10276 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RARAP10276 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RARAP10276 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
RARAP10276 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RARAP10276 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RARAP10276 RNA5SP119-201ENST00000362715 117 ntBASIC3.45□□□□□ -1.86
RARAP10276 MIR548A1-201ENST00000385041 97 ntBASIC3.45□□□□□ -1.86
RARAP10276 U6atac.2-201ENST00000408644 118 ntBASIC3.45□□□□□ -1.86
RARAP10276 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RARAP10276 AC009969.1-201ENST00000438726 172 ntBASIC3.45□□□□□ -1.86
RARAP10276 MTCO1P44-201ENST00000441935 243 ntBASIC3.45□□□□□ -1.86
RARAP10276 AC025750.2-201ENST00000442609 450 ntBASIC3.45□□□□□ -1.86
RARAP10276 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.45□□□□□ -1.86
RARAP10276 Y_RNA.649-201ENST00000459077 103 ntBASIC3.45□□□□□ -1.86
RARAP10276 RPS29P21-201ENST00000496272 170 ntBASIC3.45□□□□□ -1.86
RARAP10276 SNORA72.7-201ENST00000516349 94 ntBASIC3.45□□□□□ -1.86
RARAP10276 AC245166.1-201ENST00000521012 253 ntBASIC3.45□□□□□ -1.86
RARAP10276 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.45□□□□□ -1.86
RARAP10276 U3.45-201ENST00000607547 219 ntBASIC3.45□□□□□ -1.86
RARAP10276 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
RARAP10276 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
RARAP10276 JPX_2.1-201ENST00000614161 69 ntBASIC3.45□□□□□ -1.86
RARAP10276 AC002064.3-201ENST00000623448 346 ntBASIC3.45□□□□□ -1.86
RARAP10276 U6.98-201ENST00000637157 84 ntBASIC3.45□□□□□ -1.86
RARAP10276 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms