Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC025754.2-201ENST00000606491 432 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.15□□□□□ -1.91
VAMP4O75379 snoZ196.1-201ENST00000625269 89 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VAMP4O75379 MIR449A-201ENST00000362113 91 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 Y_RNA.23-201ENST00000362496 106 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 SNORD50.2-201ENST00000365465 70 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 RNU6-804P-201ENST00000384286 107 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 MIR626-201ENST00000385032 94 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 Y_RNA.580-201ENST00000391004 95 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 HMGN2P35-201ENST00000412164 270 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.14□□□□□ -1.91
VAMP4O75379 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
VAMP4O75379 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 AC069294.1-201ENST00000608397 350 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 MIR5739-201ENST00000619803 80 ntBASIC3.14□□□□□ -1.91
VAMP4O75379 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.14□□□□□ -1.91
VAMP4O75379 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VAMP4O75379 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VAMP4O75379 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VAMP4O75379 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.13□□□□□ -1.91
VAMP4O75379 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAMP4O75379 VTRNA1-1-201ENST00000363120 99 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 MIR95-201ENST00000385072 81 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RNU6-381P-201ENST00000391259 108 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 MIR873-201ENST00000401120 77 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 AL355796.1-201ENST00000406706 323 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RNU2-2P-201ENST00000410396 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RPS20P10-201ENST00000451209 253 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 AC016925.1-201ENST00000458303 298 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RPS27AP9-201ENST00000477681 438 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 AC005840.1-201ENST00000498412 377 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 ATP5EP1-201ENST00000510257 156 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RNU6-948P-201ENST00000516374 107 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 AC021269.2-201ENST00000532318 330 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RNU2-4P-201ENST00000606190 192 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.15-201ENST00000611544 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.16-201ENST00000613119 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.12-201ENST00000613778 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.9-201ENST00000615427 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.11-201ENST00000616345 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.2-201ENST00000616535 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.3-201ENST00000617785 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.19-201ENST00000618602 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 RNU2-1-201ENST00000618664 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.6-201ENST00000619225 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.5-201ENST00000619465 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 U2.10-201ENST00000620268 191 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 CTSLP2-204ENST00000629029 392 ntBASIC3.13□□□□□ -1.91
VAMP4O75379 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VAMP4O75379 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VAMP4O75379 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.12□□□□□ -1.91
VAMP4O75379 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VAMP4O75379 Y_RNA.272-201ENST00000364696 102 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 RNU6-144P-201ENST00000383951 107 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 SNORA8.3-201ENST00000384679 139 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 MTCO2P33-201ENST00000402100 465 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 RNU5E-9P-201ENST00000411164 104 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 RPL23AP7-203ENST00000449021 469 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 RN7SL499P-201ENST00000481141 276 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 AC010598.1-201ENST00000510378 103 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 RN7SKP164-201ENST00000516138 266 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.12□□□□□ -1.91
VAMP4O75379 AC104465.1-201ENST00000611365 139 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
VAMP4O75379 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
VAMP4O75379 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VAMP4O75379 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP4O75379 AC134026.1-201ENST00000623249 2239 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP4O75379 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP4O75379 MIR21-201ENST00000362134 72 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 RNA5SP289-201ENST00000362332 137 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 RNU6-103P-201ENST00000363686 107 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 RNU6-271P-201ENST00000363858 105 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 SNORA20B-201ENST00000384220 132 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 MIR613-201ENST00000385248 95 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 MIR526A2-201ENST00000390198 65 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.11□□□□□ -1.91
VAMP4O75379 AL121890.1-201ENST00000435457 205 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 SNORD65B-201ENST00000459126 73 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.11□□□□□ -1.91
VAMP4O75379 MIR3199-1-201ENST00000582434 88 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 AC046143.2-201ENST00000609789 160 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.11□□□□□ -1.91
VAMP4O75379 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP4O75379 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.11□□□□□ -1.91
VAMP4O75379 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VAMP4O75379 AC068700.1-201ENST00000565862 3754 ntBASIC3.11□□□□□ -1.91
VAMP4O75379 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
VAMP4O75379 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
VAMP4O75379 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.1□□□□□ -1.91
VAMP4O75379 SNORA27.1-201ENST00000362604 124 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 RNU6-1048P-201ENST00000364054 107 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 Y_RNA.398-201ENST00000383952 99 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 Y_RNA.412-201ENST00000384001 104 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 RNU6-1235P-201ENST00000384559 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms