Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC055731.1-201ENST00000474387 401 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 SEPT14P8-201ENST00000508026 178 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTNND1O60716 RNU7-110P-201ENST00000516891 62 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 MYL12BP1-201ENST00000569826 507 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 MIR4300-201ENST00000581016 96 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 AC005828.6-201ENST00000606610 232 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 AC006435.5-201ENST00000624486 112 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 MIR338-201ENST00000636369 67 ntBASIC2.45□□□□□ -2.02
CTNND1O60716 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTNND1O60716 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTNND1O60716 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CTNND1O60716 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CTNND1O60716 MIRLET7G-201ENST00000362280 84 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 SNORA20B-201ENST00000384220 132 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CTNND1O60716 RNU6-1109P-201ENST00000391187 107 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 AL117342.1-201ENST00000404861 406 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 AL355796.1-201ENST00000406706 323 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 RNA5SP450-201ENST00000411206 102 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 HMGN2P34-201ENST00000437647 269 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 AC005042.3-201ENST00000453230 174 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 LINC01399-202ENST00000458450 244 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 RNU6-155P-201ENST00000516347 100 ntBASIC2.44□□□□□ -2.02
CTNND1O60716 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.44□□□□□ -2.02
CTNND1O60716 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.44□□□□□ -2.02
CTNND1O60716 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CTNND1O60716 RNU6-862P-201ENST00000362804 105 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 Y_RNA.331-201ENST00000365267 102 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 RNU6-21P-201ENST00000384710 107 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 RNU6-417P-201ENST00000384712 107 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTNND1O60716 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CTNND1O60716 MTND2P29-201ENST00000438595 412 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 AL731563.1-201ENST00000442202 214 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 MTATP8P1-201ENST00000467115 207 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.43□□□□□ -2.02
CTNND1O60716 AC007229.1-201ENST00000590455 412 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 PRR13P7-201ENST00000605538 430 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 SNORD113-5-201ENST00000607261 78 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 U1.36-201ENST00000620684 176 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 SDR42E1P4-201ENST00000620894 481 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 AC022513.1-201ENST00000624512 117 ntBASIC2.43□□□□□ -2.02
CTNND1O60716 SNORD114-7-201ENST00000362520 77 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 SNORD113-8-201ENST00000363497 74 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 SNORD115-30-201ENST00000364117 82 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 AC019129.1-201ENST00000403786 261 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 IPO7P1-201ENST00000442031 636 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
CTNND1O60716 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
CTNND1O60716 AC025465.3-201ENST00000510570 311 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 AL117187.1-201ENST00000555482 181 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 AL137100.2-201ENST00000555786 315 ntBASIC2.42□□□□□ -2.02
CTNND1O60716 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.42□□□□□ -2.02
CTNND1O60716 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTNND1O60716 Y_RNA.64-201ENST00000362845 102 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 Y_RNA.105-201ENST00000363182 111 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU6-271P-201ENST00000363858 105 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU1-96P-201ENST00000364163 162 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 MIR548F4-201ENST00000408515 105 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU4-30P-201ENST00000410245 143 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU6-121P-201ENST00000410525 99 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 CST2P1-201ENST00000425770 87 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 AC099677.2-201ENST00000436385 175 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
CTNND1O60716 DYNLT3P2-201ENST00000442517 295 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNA5SP182-201ENST00000516064 82 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU6-966P-201ENST00000516479 104 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 RNU6-635P-201ENST00000516651 102 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.41□□□□□ -2.02
CTNND1O60716 AC121758.2-201ENST00000553271 193 ntBASIC2.41□□□□□ -2.02
CTNND1O60716 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.02
CTNND1O60716 CENPCP1-201ENST00000533085 2578 ntBASIC2.4□□□□□ -2.02
CTNND1O60716 SNORA27.1-201ENST00000362604 124 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 RNU6-806P-201ENST00000365147 105 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 SNORA48.1-201ENST00000390879 135 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 AL355497.1-201ENST00000406262 551 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 RNA5SP501-201ENST00000410990 112 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 AL139156.1-201ENST00000412785 841 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.4□□□□□ -2.03
CTNND1O60716 AL358176.2-201ENST00000425769 204 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 RNU6-436P-201ENST00000516171 114 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.4□□□□□ -2.03
CTNND1O60716 AC008269.2-201ENST00000561915 1105 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 MIR6845-201ENST00000613182 61 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 U6.73-201ENST00000619194 103 ntBASIC2.4□□□□□ -2.03
CTNND1O60716 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
CTNND1O60716 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.03
CTNND1O60716 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CTNND1O60716 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CTNND1O60716 Y_RNA.176-201ENST00000363815 109 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms