Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.19□□□□□ -2.22
VEGFDO43915 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.19□□□□□ -2.22
VEGFDO43915 AC026782.1-201ENST00000512952 449 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.19□□□□□ -2.22
VEGFDO43915 RNU2-56P-201ENST00000516826 190 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.19□□□□□ -2.22
VEGFDO43915 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.19□□□□□ -2.22
VEGFDO43915 AC002553.4-201ENST00000616896 331 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VEGFDO43915 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VEGFDO43915 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 AC073544.1-201ENST00000600110 1595 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VEGFDO43915 Y_RNA.2-201ENST00000362330 96 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 Y_RNA.265-201ENST00000364677 108 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 SNORA20B-201ENST00000384220 132 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-1145P-201ENST00000384246 107 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 MIR548K-201ENST00000408406 116 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-1001P-201ENST00000411265 100 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.18□□□□□ -2.22
VEGFDO43915 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 AC107399.1-201ENST00000451226 265 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-322P-201ENST00000516010 103 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-1278P-201ENST00000516130 107 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 Y_RNA.708-201ENST00000516950 96 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNU6-341P-201ENST00000516973 96 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 AC027419.1-201ENST00000522976 328 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 AF235103.2-201ENST00000525753 346 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.18□□□□□ -2.22
VEGFDO43915 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.18□□□□□ -2.22
VEGFDO43915 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 MIR6504-201ENST00000613520 61 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
VEGFDO43915 RNY1P16-201ENST00000363063 111 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 Y_RNA.269-201ENST00000364685 89 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 RNU6-505P-201ENST00000384427 107 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VEGFDO43915 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 RNU6-1050P-201ENST00000410388 107 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 MTND3P8-201ENST00000412909 339 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 RAB28P5-201ENST00000427490 651 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
VEGFDO43915 PCNPP5-201ENST00000452246 481 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AC092991.1-201ENST00000477176 376 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AC092989.1-201ENST00000481235 277 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.17□□□□□ -2.22
VEGFDO43915 SNORA31.4-201ENST00000516049 129 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 RN7SKP49-201ENST00000516675 260 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 MIR2355-201ENST00000517199 87 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AP002004.2-201ENST00000531656 154 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AC125232.2-201ENST00000592457 143 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 BX284668.6-201ENST00000606899 438 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 AC005014.2-201ENST00000607795 599 ntBASIC1.17□□□□□ -2.22
VEGFDO43915 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.17□□□□□ -2.22
VEGFDO43915 SNORD114-7-201ENST00000362520 77 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.48-201ENST00000362710 103 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.72-201ENST00000362894 103 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.224-201ENST00000364308 111 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.482-201ENST00000384377 111 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.498-201ENST00000384460 102 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 MIR653-201ENST00000385279 96 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 RNA5SP482-201ENST00000391269 118 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 Y_RNA.594-201ENST00000410373 140 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 AL589823.1-201ENST00000429577 183 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.16□□□□□ -2.22
VEGFDO43915 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.16□□□□□ -2.22
VEGFDO43915 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.16□□□□□ -2.22
VEGFDO43915 RNA5SP20-201ENST00000515976 84 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.16□□□□□ -2.22
VEGFDO43915 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 AC093783.1-201ENST00000612976 329 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 AC068647.2-201ENST00000637380 353 ntBASIC1.16□□□□□ -2.22
VEGFDO43915 SNORA27.1-201ENST00000362604 124 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 Y_RNA.86-201ENST00000363020 111 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 RNU6-879P-201ENST00000364328 108 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AL355796.1-201ENST00000406706 323 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 ELOCP21-201ENST00000412558 336 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.15□□□□□ -2.23
VEGFDO43915 RPS3AP52-201ENST00000435639 297 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 RNU7-87P-201ENST00000459343 62 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AL358944.1-201ENST00000528537 144 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AC090049.2-201ENST00000550377 109 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 PISRT1.1-201ENST00000616930 107 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 AC027335.2-201ENST00000624030 375 ntBASIC1.15□□□□□ -2.23
VEGFDO43915 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
VEGFDO43915 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
VEGFDO43915 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 SNORA2.2-201ENST00000365473 135 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 RNU6-1310P-201ENST00000384153 107 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 RNU6-376P-201ENST00000384731 106 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 MIR520G-201ENST00000385064 90 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 MIR518E-201ENST00000385252 88 ntBASIC1.14□□□□□ -2.23
VEGFDO43915 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms