Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.78□□□□□ -1.8
H3BM21 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
H3BM21 snoU2_19.1-201ENST00000362361 80 ntBASIC3.78□□□□□ -1.8
H3BM21 RNU6-661P-201ENST00000362409 107 ntBASIC3.78□□□□□ -1.8
H3BM21 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
H3BM21 SNORD116-10-201ENST00000363791 102 ntBASIC3.78□□□□□ -1.8
H3BM21 RNU1-89P-201ENST00000384592 164 ntBASIC3.78□□□□□ -1.8
H3BM21 NDUFB4P4-201ENST00000404822 243 ntBASIC3.78□□□□□ -1.8
H3BM21 AC010099.1-201ENST00000455434 375 ntBASIC3.78□□□□□ -1.8
H3BM21 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
H3BM21 AC026241.1-201ENST00000517873 2142 ntBASIC3.78□□□□□ -1.8
H3BM21 MIR5187-201ENST00000583479 76 ntBASIC3.78□□□□□ -1.8
H3BM21 MIR4753-201ENST00000585119 83 ntBASIC3.78□□□□□ -1.8
H3BM21 AC019176.2-201ENST00000611579 315 ntBASIC3.78□□□□□ -1.8
H3BM21 MIR3199-2-201ENST00000636243 86 ntBASIC3.78□□□□□ -1.8
H3BM21 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3BM21 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.78□□□□□ -1.8
H3BM21 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
H3BM21 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
H3BM21 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
H3BM21 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
H3BM21 RNU4-67P-201ENST00000364569 141 ntBASIC3.77□□□□□ -1.81
H3BM21 U8.11-201ENST00000384699 133 ntBASIC3.77□□□□□ -1.81
H3BM21 SNORA11.2-201ENST00000408318 127 ntBASIC3.77□□□□□ -1.81
H3BM21 RNU2-49P-201ENST00000410666 184 ntBASIC3.77□□□□□ -1.81
H3BM21 RPL30P4-201ENST00000429309 333 ntBASIC3.77□□□□□ -1.81
H3BM21 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.77□□□□□ -1.81
H3BM21 U8.18-201ENST00000459285 133 ntBASIC3.77□□□□□ -1.81
H3BM21 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.77□□□□□ -1.81
H3BM21 RN7SKP18-201ENST00000516005 275 ntBASIC3.77□□□□□ -1.81
H3BM21 AC022695.1-201ENST00000522089 237 ntBASIC3.77□□□□□ -1.81
H3BM21 AC008507.4-201ENST00000585464 127 ntBASIC3.77□□□□□ -1.81
H3BM21 Y_RNA.773-201ENST00000607168 90 ntBASIC3.77□□□□□ -1.81
H3BM21 AC096577.2-201ENST00000611455 153 ntBASIC3.77□□□□□ -1.81
H3BM21 AC012314.7-201ENST00000619693 93 ntBASIC3.77□□□□□ -1.81
H3BM21 AC009093.8-201ENST00000641769 292 ntBASIC3.77□□□□□ -1.81
H3BM21 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
H3BM21 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
H3BM21 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.76□□□□□ -1.81
H3BM21 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 RNA5SP119-201ENST00000362715 117 ntBASIC3.76□□□□□ -1.81
H3BM21 RNU1-22P-201ENST00000363334 158 ntBASIC3.76□□□□□ -1.81
H3BM21 RNU6-1210P-201ENST00000363775 107 ntBASIC3.76□□□□□ -1.81
H3BM21 SNORA73.2-201ENST00000364946 201 ntBASIC3.76□□□□□ -1.81
H3BM21 RNU6-1189P-201ENST00000383958 107 ntBASIC3.76□□□□□ -1.81
H3BM21 MIR300-201ENST00000401138 83 ntBASIC3.76□□□□□ -1.81
H3BM21 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.76□□□□□ -1.81
H3BM21 AL035423.1-201ENST00000420331 213 ntBASIC3.76□□□□□ -1.81
H3BM21 AC009414.1-201ENST00000427200 443 ntBASIC3.76□□□□□ -1.81
H3BM21 SCARNA13-201ENST00000516672 275 ntBASIC3.76□□□□□ -1.81
H3BM21 MIR3683-201ENST00000580847 82 ntBASIC3.76□□□□□ -1.81
H3BM21 AC064859.1-201ENST00000624741 174 ntBASIC3.76□□□□□ -1.81
H3BM21 U6.98-201ENST00000637157 84 ntBASIC3.76□□□□□ -1.81
H3BM21 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.76□□□□□ -1.81
H3BM21 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.76□□□□□ -1.81
H3BM21 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H3BM21 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H3BM21 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.76□□□□□ -1.81
H3BM21 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
H3BM21 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
H3BM21 RNU6-655P-201ENST00000362858 107 ntBASIC3.75□□□□□ -1.81
H3BM21 SNORD115-19-201ENST00000363098 82 ntBASIC3.75□□□□□ -1.81
H3BM21 SNORD115-18-201ENST00000363293 82 ntBASIC3.75□□□□□ -1.81
H3BM21 RNU1-96P-201ENST00000364163 162 ntBASIC3.75□□□□□ -1.81
H3BM21 SNORD115-17-201ENST00000364612 82 ntBASIC3.75□□□□□ -1.81
H3BM21 Y_RNA.410-201ENST00000383992 113 ntBASIC3.75□□□□□ -1.81
H3BM21 RPS29P4-201ENST00000414733 161 ntBASIC3.75□□□□□ -1.81
H3BM21 AL513477.1-202ENST00000417061 214 ntBASIC3.75□□□□□ -1.81
H3BM21 AL353813.1-201ENST00000440700 253 ntBASIC3.75□□□□□ -1.81
H3BM21 AC016717.1-201ENST00000448918 286 ntBASIC3.75□□□□□ -1.81
H3BM21 RNU7-170P-201ENST00000459303 61 ntBASIC3.75□□□□□ -1.81
H3BM21 SCARNA14-201ENST00000516903 136 ntBASIC3.75□□□□□ -1.81
H3BM21 U3.45-201ENST00000607547 219 ntBASIC3.75□□□□□ -1.81
H3BM21 RNU6-91P-201ENST00000607774 107 ntBASIC3.75□□□□□ -1.81
H3BM21 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3BM21 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
H3BM21 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3BM21 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3BM21 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3BM21 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
H3BM21 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3BM21 RNU6-633P-201ENST00000362612 103 ntBASIC3.74□□□□□ -1.81
H3BM21 RNU6-975P-201ENST00000384296 105 ntBASIC3.74□□□□□ -1.81
H3BM21 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
H3BM21 RNU2-40P-201ENST00000410833 196 ntBASIC3.74□□□□□ -1.81
H3BM21 Y_RNA.621-201ENST00000411065 96 ntBASIC3.74□□□□□ -1.81
H3BM21 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.74□□□□□ -1.81
H3BM21 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.74□□□□□ -1.81
H3BM21 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.74□□□□□ -1.81
H3BM21 AL513534.2-201ENST00000603836 250 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms