Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 RNU6-653P-201ENST00000363074 106 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 RNU6-918P-201ENST00000391219 106 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 COX6CP10-201ENST00000416832 224 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 AC104332.1-201ENST00000440471 797 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 HSPE1P13-201ENST00000451143 297 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 SNORA59A-201ENST00000459326 152 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 IGLV3-17-201ENST00000519099 244 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 AC013791.1-201ENST00000616619 62 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 AC006435.5-201ENST00000624486 112 ntBASIC2.87□□□□□ -1.95
CCDC66A2RUB6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC66A2RUB6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC66A2RUB6 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 Y_RNA.435-201ENST00000384095 112 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 RNU6-493P-201ENST00000391321 108 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 PCNPP3-201ENST00000393579 471 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 AC016909.1-201ENST00000415916 166 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 RPS12P2-201ENST00000439728 269 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 RPS26P55-201ENST00000471178 356 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC66A2RUB6 RNU1-104P-201ENST00000517280 175 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC66A2RUB6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC66A2RUB6 MIR7106-201ENST00000612419 65 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC66A2RUB6 AC007336.1-201ENST00000576365 3828 ntBASIC2.86□□□□□ -1.95
CCDC66A2RUB6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-682P-201ENST00000363843 106 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 SNORA80A-201ENST00000363922 136 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-899P-201ENST00000363947 107 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-407P-201ENST00000365280 104 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 SNORA25B-201ENST00000365507 128 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 MTCO2P33-201ENST00000402100 465 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AL603908.1-201ENST00000406098 201 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AL355497.1-201ENST00000406262 551 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AC025750.2-201ENST00000442609 450 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 HMGB3P3-201ENST00000510526 400 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 SNORA4.4-201ENST00000515921 135 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNU6-861P-201ENST00000516745 106 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AC022559.1-201ENST00000520905 205 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 AC027419.1-201ENST00000522976 328 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 MIR4308-201ENST00000580634 81 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 U4atac.1-201ENST00000618345 95 ntBASIC2.85□□□□□ -1.95
CCDC66A2RUB6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC66A2RUB6 Y_RNA.233-201ENST00000364407 101 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC66A2RUB6 RPS20P10-201ENST00000451209 253 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC66A2RUB6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 RNA5SP20-201ENST00000515976 84 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 RNU6-856P-201ENST00000516959 98 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC100767.1-201ENST00000528178 123 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC087441.2-201ENST00000529141 262 ntBASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC66A2RUB6 AC134026.1-201ENST00000623249 2239 ntBASIC2.84□□□□□ -1.96
CCDC66A2RUB6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC66A2RUB6 MIR340-201ENST00000362125 95 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 SRIP3-201ENST00000413200 219 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AC009238.1-201ENST00000442165 424 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AC009237.6-201ENST00000446969 424 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 RNU7-141P-201ENST00000459304 62 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC66A2RUB6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC66A2RUB6 AC005336.3-201ENST00000623833 2679 ntBASIC2.83□□□□□ -1.96
CCDC66A2RUB6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC66A2RUB6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC66A2RUB6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.82□□□□□ -1.96
CCDC66A2RUB6 RNU4-17P-201ENST00000365598 141 ntBASIC2.82□□□□□ -1.96
CCDC66A2RUB6 AC010154.1-201ENST00000425857 269 ntBASIC2.82□□□□□ -1.96
CCDC66A2RUB6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC66A2RUB6 SUMO1P3-201ENST00000439961 304 ntBASIC2.82□□□□□ -1.96
CCDC66A2RUB6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC66A2RUB6 MIR5694-201ENST00000581190 76 ntBASIC2.82□□□□□ -1.96
CCDC66A2RUB6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC66A2RUB6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC66A2RUB6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC66A2RUB6 CENPCP1-201ENST00000533085 2578 ntBASIC2.81□□□□□ -1.96
CCDC66A2RUB6 SNORD116-13-201ENST00000384408 92 ntBASIC2.81□□□□□ -1.96
CCDC66A2RUB6 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
CCDC66A2RUB6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
CCDC66A2RUB6 HSPE1P21-201ENST00000438283 308 ntBASIC2.81□□□□□ -1.96
CCDC66A2RUB6 AC010409.1-201ENST00000487382 476 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms