Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPS29P17-201ENST00000430795 166 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AC011998.1-201ENST00000433403 117 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AC244505.4-201ENST00000434905 287 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 SSXP5-201ENST00000443473 287 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AC106707.2-201ENST00000484182 374 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AC091167.1-201ENST00000492017 396 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 RNA5SP446-201ENST00000515955 82 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 RNU6-965P-201ENST00000516721 96 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AP002004.2-201ENST00000531656 154 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 AC034229.5-201ENST00000624258 185 ntBASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
PCDHGA4Q9Y5G9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.34□□□□□ -1.72
PCDHGA4Q9Y5G9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHGA4Q9Y5G9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.34□□□□□ -1.72
PCDHGA4Q9Y5G9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORD68-201ENST00000363214 84 ntBASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 RN7SL271P-201ENST00000487601 295 ntBASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 AC093259.1-201ENST00000509755 300 ntBASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 AC145423.2-201ENST00000610631 239 ntBASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA4Q9Y5G9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORA1B-201ENST00000362535 133 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 snoU2-30.2-201ENST00000362805 70 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORD77B-201ENST00000391112 67 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 AC034105.4-201ENST00000568304 277 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 MIR4762-201ENST00000585261 75 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 U7.8-201ENST00000619968 63 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 AC021613.1-201ENST00000623880 111 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 AL512310.12-203ENST00000640543 90 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 AC073346.2-201ENST00000624724 2058 ntBASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA4Q9Y5G9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 Y_RNA.336-201ENST00000365307 109 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 RNA5SP151-201ENST00000365632 117 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU6-616P-201ENST00000384353 107 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 AC123900.1-201ENST00000420390 96 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORA84-201ENST00000459229 133 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 IFITM8P-201ENST00000522529 394 ntBASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA4Q9Y5G9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU6-1313P-201ENST00000362622 102 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 U8.5-201ENST00000364528 136 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORA1.1-201ENST00000364671 133 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU6-590P-201ENST00000365039 107 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 PHBP16-201ENST00000446318 950 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 HMGN2P16-201ENST00000456802 261 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 U4atac.1-201ENST00000618345 95 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 AC091905.2-201ENST00000623143 306 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA4Q9Y5G9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU1-63P-201ENST00000383902 164 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU1-89P-201ENST00000384592 164 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 POLR2J4-204ENST00000418424 324 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RNU7-113P-201ENST00000459273 62 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RN7SL98P-201ENST00000462271 300 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 SNORA31.21-201ENST00000517180 77 ntBASIC4.29□□□□□ -1.72
PCDHGA4Q9Y5G9 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms