Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SIT1Q9Y3P8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIT1Q9Y3P8 AC010332.2-201ENST00000613083 1904 ntBASIC2.97□□□□□ -1.93
SIT1Q9Y3P8 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 RNU6-643P-201ENST00000384018 107 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 MIR518C-201ENST00000384822 101 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 SNORA40-201ENST00000388090 126 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 SNORA36B-201ENST00000410438 131 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AC010154.1-201ENST00000425857 269 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AC245047.8-201ENST00000456455 284 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 RNU6-498P-201ENST00000459468 107 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AC021205.2-201ENST00000480069 347 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 MIR449C-201ENST00000516047 92 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 RNU6-313P-201ENST00000516317 112 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AC127455.1-201ENST00000565496 145 ntBASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SIT1Q9Y3P8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 RNA5SP322-201ENST00000363617 119 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 RNU6-674P-201ENST00000363831 107 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 RNU4-11P-201ENST00000365287 132 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 RNU6-728P-201ENST00000365375 104 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 MIR15B-201ENST00000385045 98 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AL606845.1-201ENST00000404881 255 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 MIR1278-201ENST00000408753 81 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 RPL30P4-201ENST00000429309 333 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AL121914.1-201ENST00000450188 156 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AC117454.1-201ENST00000491120 168 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AC025647.1-201ENST00000517879 253 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 MIR3646-201ENST00000578301 84 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AC005972.2-201ENST00000604690 348 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 U7.8-201ENST00000619968 63 ntBASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SIT1Q9Y3P8 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 SNORD116-13-201ENST00000384408 92 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 MIR504-201ENST00000385065 83 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 MT-TT-201ENST00000387460 66 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 RNU6-1154P-201ENST00000391001 104 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 MIR513C-201ENST00000401352 84 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 AC008134.1-201ENST00000420943 193 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 RPL23AP58-201ENST00000440453 469 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 RPS12P18-201ENST00000442381 270 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 AC080013.2-201ENST00000460866 323 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 AC010531.2-201ENST00000465012 153 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 RNA5SP20-201ENST00000515976 84 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 SCARNA3-201ENST00000517097 143 ntBASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIT1Q9Y3P8 AC091152.2-201ENST00000591628 2569 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 SNORD14D-201ENST00000384390 87 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 MIR95-201ENST00000385072 81 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 RNU6-57P-201ENST00000411348 103 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AL135786.1-201ENST00000415892 214 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AC009969.1-201ENST00000438726 172 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AL137159.1-201ENST00000452808 512 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 POLR3GP1-201ENST00000594073 261 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 MIR3658-201ENST00000636291 56 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 U6.98-201ENST00000637157 84 ntBASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.93□□□□□ -1.94
SIT1Q9Y3P8 SNORA68.1-201ENST00000364537 132 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RNU6-117P-201ENST00000365415 107 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 SNORA22C-201ENST00000384614 134 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 MIR9-1-201ENST00000385198 89 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 MIR591-201ENST00000385290 95 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RNA5SP496-201ENST00000391240 109 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RNU6-383P-201ENST00000410864 94 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RN7SKP101-201ENST00000411376 320 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 AC006461.1-201ENST00000412637 326 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 ARF4P2-201ENST00000430209 526 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 AC008267.6-201ENST00000441664 139 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RNU7-197P-201ENST00000458836 62 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 snoU13.26-201ENST00000459452 105 ntBASIC2.92□□□□□ -1.94
SIT1Q9Y3P8 RN7SL330P-201ENST00000469709 307 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms