Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC027124.2-201ENST00000428249 105 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 AP001486.1-201ENST00000463339 476 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 AC093663.1-201ENST00000497190 394 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-579P-201ENST00000516879 102 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 AC026333.2-201ENST00000542164 106 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 MIR548Z-201ENST00000584743 97 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 RNVU1-4-201ENST00000612985 164 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 MIR7112-201ENST00000616126 65 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 AC005562.2-201ENST00000618264 111 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-173P-201ENST00000364215 104 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 MIR184-201ENST00000384962 84 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-816P-201ENST00000390914 107 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 SNORD17-201ENST00000390930 237 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1268P-201ENST00000391214 107 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1239P-201ENST00000391310 107 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 AL355796.1-201ENST00000406706 323 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 Y_RNA.620-201ENST00000411009 88 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-938P-201ENST00000411285 103 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 DBIP2-201ENST00000419076 262 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RPL27AP8-201ENST00000424277 446 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 VDAC1P3-201ENST00000434069 851 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RPS26P48-201ENST00000491713 339 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 AC083906.5-201ENST00000503722 328 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 MIR3690-201ENST00000580266 75 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 SNORD84-203ENST00000584275 78 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 AL451007.1-201ENST00000595491 289 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 U2.21-201ENST00000637295 81 ntBASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDZRN3Q9UPQ7 MFSD8-233ENST00000641482 4860 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 MIR30E-201ENST00000362104 92 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-170P-201ENST00000362832 104 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 SNORD11-201ENST00000459124 84 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 SNORA70.18-201ENST00000516696 98 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 RPL23AP91-201ENST00000569211 455 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 MIR3921-201ENST00000577308 85 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 MIR3923-201ENST00000579521 83 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 MIR4425-201ENST00000580572 84 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 AC110741.2-201ENST00000605278 268 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 Pinc.1-201ENST00000616452 154 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.44□□□□□ -1.7
PDZRN3Q9UPQ7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 SNORA33-201ENST00000363664 130 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1138P-201ENST00000365359 106 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 AP000567.1-201ENST00000406413 156 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 AL121890.1-201ENST00000435457 205 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 U3.44-201ENST00000458938 192 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 SRIP1-201ENST00000489235 288 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 MIR5004-201ENST00000579078 107 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 AC090897.2-201ENST00000581715 130 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 MIR5006-201ENST00000583027 110 ntBASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDZRN3Q9UPQ7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 AL356292.1-201ENST00000283110 373 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 Y_RNA.10-201ENST00000362371 110 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-778P-201ENST00000363269 103 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-622P-201ENST00000384272 103 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 EI24P2-201ENST00000397776 1076 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNA5SP390-201ENST00000410191 113 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 MIR1912-201ENST00000410389 80 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 AC018634.1-201ENST00000437554 401 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 AC025518.1-201ENST00000479856 347 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 HMGB1P22-201ENST00000505315 124 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 PHBP14-201ENST00000512887 367 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNU7-149P-201ENST00000516739 59 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 MIR2276-201ENST00000516886 89 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 MIR5680-201ENST00000577577 84 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 MIR3136-201ENST00000583498 78 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 AL929325.1-201ENST00000603096 117 ntBASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 PCGEM1.1-201ENST00000613431 131 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms