Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU2-51P-201ENST00000410708 197 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RPS29P6-201ENST00000438196 145 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RNU6-1098P-201ENST00000516772 96 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RNU6-453P-201ENST00000516819 85 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RN7SKP282-201ENST00000516824 299 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 MIR3684-201ENST00000579779 74 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 RPL30P11-203ENST00000598995 310 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
PDLIM7Q9NR12 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 SNORA67.4-201ENST00000384688 142 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RNU6-417P-201ENST00000384712 107 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 MIR569-201ENST00000385228 96 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 Y_RNA.586-201ENST00000391146 98 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 MICF-203ENST00000432679 129 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 snoU13.26-201ENST00000459452 105 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 SCARNA8-201ENST00000515924 131 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RNA5SP24-201ENST00000516478 95 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RNU6-62P-201ENST00000516526 102 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RNU5F-4P-201ENST00000516581 114 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RNU7-121P-201ENST00000516604 62 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 MIR4431-201ENST00000579990 94 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 RPL17P51-201ENST00000605218 238 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 AC025754.2-201ENST00000606491 432 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM7Q9NR12 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PDLIM7Q9NR12 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDLIM7Q9NR12 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
PDLIM7Q9NR12 RNU6-1205P-201ENST00000363625 106 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 SNORA51.4-201ENST00000364993 124 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 RNU6-969P-201ENST00000383900 105 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 MIR504-201ENST00000385065 83 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 MIR1185-2-201ENST00000408687 86 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 MIR449C-201ENST00000516047 92 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 SNORA70.12-201ENST00000516084 153 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 RNU6-1007P-201ENST00000516586 107 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 AC022616.8-201ENST00000533569 253 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 AC103810.1-201ENST00000579873 453 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 MIR6817-201ENST00000615588 66 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 AC064859.1-201ENST00000624741 174 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 AC100821.1-201ENST00000523153 2479 ntBASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM7Q9NR12 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 Y_RNA.172-201ENST00000363765 102 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 RNU6-257P-201ENST00000410238 98 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 AC245047.8-201ENST00000456455 284 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 HMGN2P9-201ENST00000476875 229 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 RNU6-479P-201ENST00000516348 105 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 AC093331.1-201ENST00000521474 169 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 AC109810.1-201ENST00000534066 224 ntBASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM7Q9NR12 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 RNU6-1290P-201ENST00000362957 109 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 Y_RNA.124-201ENST00000363339 93 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 RNA5SP68-201ENST00000363885 119 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 MIR627-201ENST00000384979 97 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 MIR526A2-201ENST00000390198 65 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 RNU6-1154P-201ENST00000391001 104 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 AL138827.1-201ENST00000402666 306 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 AC003685.2-201ENST00000422795 395 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 AC107027.2-201ENST00000512197 115 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 MIR548X2-201ENST00000579776 100 ntBASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 SNORD53-201ENST00000579969 78 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms