Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP29Q9HBJ7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USP29Q9HBJ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USP29Q9HBJ7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USP29Q9HBJ7 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 RNU6-379P-201ENST00000363813 104 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.4□□□□□ -2.03
USP29Q9HBJ7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.4□□□□□ -2.03
USP29Q9HBJ7 RPL39P38-201ENST00000467018 153 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 SERF1AP1-201ENST00000514575 187 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 MIR4648-201ENST00000580107 72 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 MIR3128-201ENST00000581957 66 ntBASIC2.4□□□□□ -2.03
USP29Q9HBJ7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.136-201ENST00000363444 102 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 RNU6-326P-201ENST00000365480 107 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 SNORA25B-201ENST00000365507 128 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 RNU7-57P-201ENST00000459540 60 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 RPS29P21-201ENST00000496272 170 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 RNA5SP490-201ENST00000517141 136 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 MIR1273D-201ENST00000577266 86 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 MIR4753-201ENST00000585119 83 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 AC010900.2-201ENST00000604508 210 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 AC005828.6-201ENST00000606610 232 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 AC006001.4-201ENST00000622243 395 ntBASIC2.39□□□□□ -2.03
USP29Q9HBJ7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP29Q9HBJ7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USP29Q9HBJ7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.38□□□□□ -2.03
USP29Q9HBJ7 SNORD115-30-201ENST00000364117 82 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 AL357139.1-201ENST00000407792 426 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 MTCO1P44-201ENST00000441935 243 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 MRPS10P1-201ENST00000448483 130 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 AC016717.1-201ENST00000448918 286 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 MTND4LP30-201ENST00000454092 297 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-221P-201ENST00000459541 99 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-436P-201ENST00000516171 114 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-155P-201ENST00000516347 100 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU2-31P-201ENST00000516954 155 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU6-667P-201ENST00000517186 102 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.38□□□□□ -2.03
USP29Q9HBJ7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
USP29Q9HBJ7 MIR4658-201ENST00000584344 65 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.38□□□□□ -2.03
USP29Q9HBJ7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USP29Q9HBJ7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.60-201ENST00000362831 98 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 RNU6-418P-201ENST00000384035 107 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.476-201ENST00000384347 108 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC010531.2-201ENST00000465012 153 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 RNU6-991P-201ENST00000516168 107 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC021269.2-201ENST00000532318 330 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 snoZ196.1-201ENST00000625269 89 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 U6.115-201ENST00000636045 103 ntBASIC2.37□□□□□ -2.03
USP29Q9HBJ7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
USP29Q9HBJ7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 RNU6-438P-201ENST00000365561 103 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.416-201ENST00000384014 113 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.477-201ENST00000384352 108 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 SNORD58.1-201ENST00000391313 66 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AL603910.2-201ENST00000407268 136 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 U3.40-201ENST00000408706 208 ntBASIC2.36□□□□□ -2.03
USP29Q9HBJ7 AC123900.1-201ENST00000420390 96 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms