Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL357075.2-201ENST00000614906 189 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC137590.2-201ENST00000619709 240 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 AC090971.5-201ENST00000621102 293 ntBASIC1.25□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU6-137P-201ENST00000363680 108 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNORD114-6-201ENST00000364393 72 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU4-76P-201ENST00000364509 141 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNORD87-201ENST00000364849 89 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU6-611P-201ENST00000384276 104 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 MIR329-1-201ENST00000385028 80 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 MTCO2P12-201ENST00000427426 682 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU7-14P-201ENST00000459331 62 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC091179.3-201ENST00000474761 144 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RNA5SP54-201ENST00000516951 92 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNORA44.1-201ENST00000517031 108 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 SNORD116.3-201ENST00000517176 78 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC022868.1-201ENST00000517767 391 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 RRN3P3-201ENST00000549207 578 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 MIR5695-201ENST00000579717 85 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 7SK.7-201ENST00000603504 247 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC133104.2-201ENST00000615272 193 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 MIR4272-201ENST00000635924 64 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
RSPO3Q9BXY4 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-727P-201ENST00000363592 107 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 SNORA22B-201ENST00000383876 138 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-541P-201ENST00000384709 110 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 SNORA69.1-201ENST00000390904 137 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 MTND4P28-201ENST00000426217 387 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 USP9YP16-201ENST00000430287 407 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 MTND4P19-201ENST00000446659 478 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AC009237.7-201ENST00000447357 229 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 USP9YP23-201ENST00000455085 407 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RPS23P5-201ENST00000495419 428 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-976P-201ENST00000516086 111 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1137P-201ENST00000517073 99 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AC026271.5-201ENST00000577873 130 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 MIR3171-201ENST00000584270 74 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AC134503.1-201ENST00000633048 54 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
RSPO3Q9BXY4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.11-201ENST00000362375 109 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 RNU6-418P-201ENST00000384035 107 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 MIR625-201ENST00000385047 85 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 MCFD2P1-201ENST00000417812 300 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 MTCO1P44-201ENST00000441935 243 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC016717.1-201ENST00000448918 286 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC010469.2-201ENST00000496412 480 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 RN7SKP295-201ENST00000517264 153 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC093023.1-201ENST00000547375 507 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 MIR5188-201ENST00000583467 113 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 SNRPGP20-201ENST00000604477 205 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC006157.1-201ENST00000611750 366 ntBASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RSPO3Q9BXY4 MTND5P35-201ENST00000557537 1720 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms