Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FAM35CP-201ENST00000554755 2470 ntBASIC3.75□□□□□ -1.81
COL25A1Q9BXS0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 RNU6-170P-201ENST00000362832 104 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 RNU6-944P-201ENST00000364023 107 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 RNU6-991P-201ENST00000516168 107 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 RNU6-795P-201ENST00000516323 103 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 RNU6-928P-201ENST00000516876 104 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 AC109329.2-201ENST00000519658 482 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 AC011604.1-201ENST00000545978 196 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 AC005086.4-201ENST00000623065 213 ntBASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL25A1Q9BXS0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 MIR448-201ENST00000362131 111 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 RNU1-44P-201ENST00000384453 163 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 MIR300-201ENST00000401138 83 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 RNU6-938P-201ENST00000411285 103 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 AC022523.2-201ENST00000561045 150 ntBASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL25A1Q9BXS0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 RNU6-655P-201ENST00000362858 107 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 RNU1-72P-201ENST00000362976 153 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 Y_RNA.226-201ENST00000364337 114 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 SNORD32B-201ENST00000364460 84 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 SNORD115-35-201ENST00000365122 82 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 HDGFP1-201ENST00000405943 252 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 BTF3P4-201ENST00000418852 495 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 DBIP2-201ENST00000419076 262 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 AC083863.1-201ENST00000438811 231 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 RNU7-123P-201ENST00000515911 60 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 RNU6-693P-201ENST00000516134 107 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 GTF3AP2-201ENST00000557014 266 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 MIR3117-201ENST00000584034 78 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 FAM35BP-202ENST00000497389 3337 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 AC010680.1-201ENST00000590024 3590 ntBASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
COL25A1Q9BXS0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.71□□□□□ -1.81
COL25A1Q9BXS0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 Y_RNA.118-201ENST00000363300 101 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 Y_RNA.190-201ENST00000363964 101 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 Y_RNA.426-201ENST00000384068 113 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 RNU6-975P-201ENST00000384296 105 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 RNU6-57P-201ENST00000411348 103 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 RPL30P4-201ENST00000429309 333 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 RNU7-164P-201ENST00000459221 62 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 RN7SKP282-201ENST00000516824 299 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 AC068657.1-201ENST00000520807 306 ntBASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
COL25A1Q9BXS0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 RNU1-22P-201ENST00000363334 158 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 Y_RNA.164-201ENST00000363709 102 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 RNY1P6-201ENST00000384193 109 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 RNU6-750P-201ENST00000390946 107 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 U8.17-201ENST00000391292 132 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 MIR921-201ENST00000401133 56 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 snoU13.23-201ENST00000458863 104 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 VWA8P1-201ENST00000510889 176 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 RNA5SP445-201ENST00000515889 115 ntBASIC3.7□□□□□ -1.82
COL25A1Q9BXS0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms