Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RNU6-971P-201ENST00000516920 106 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 RNU6-56P-201ENST00000516986 93 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 AC091178.2-201ENST00000584401 117 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 AC120024.3-201ENST00000603167 156 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 AC022217.4-201ENST00000604389 163 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
CITED4Q96RK1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
CITED4Q96RK1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CITED4Q96RK1 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 SNORD35B-201ENST00000363660 87 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNU6-1082P-201ENST00000364574 107 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 SNORA26.7-201ENST00000391288 122 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 PTMAP2-201ENST00000397627 327 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 AL117342.1-201ENST00000404861 406 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNU2-51P-201ENST00000410708 197 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 AL157831.1-201ENST00000426134 473 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.19□□□□□ -1.9
CITED4Q96RK1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CITED4Q96RK1 AC092991.1-201ENST00000477176 376 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 TRBV12-1-201ENST00000479785 344 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RN7SL271P-201ENST00000487601 295 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 AL163195.1-201ENST00000496941 348 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNU6-313P-201ENST00000516317 112 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNA5SP519-201ENST00000516480 119 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNU6-341P-201ENST00000516973 96 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 RNU1-45P-201ENST00000517191 141 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 CYCSP26-201ENST00000534107 320 ntBASIC3.19□□□□□ -1.9
CITED4Q96RK1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CITED4Q96RK1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CITED4Q96RK1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CITED4Q96RK1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CITED4Q96RK1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CITED4Q96RK1 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CITED4Q96RK1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CITED4Q96RK1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CITED4Q96RK1 Y_RNA.91-201ENST00000363042 107 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 RNA5SP283-201ENST00000365604 119 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 MIR515-2-201ENST00000384883 83 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 MIR515-1-201ENST00000384884 83 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 SNORA26-201ENST00000391286 122 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 AC245047.4-201ENST00000433189 144 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 AL049830.1-201ENST00000468034 425 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 RN7SL807P-201ENST00000470923 297 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 MIR3944-201ENST00000581277 108 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 AC008739.3-201ENST00000603262 127 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 U6.108-201ENST00000637764 58 ntBASIC3.18□□□□□ -1.9
CITED4Q96RK1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CITED4Q96RK1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.18□□□□□ -1.9
CITED4Q96RK1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.18□□□□□ -1.9
CITED4Q96RK1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CITED4Q96RK1 ICE2P2-201ENST00000483823 2787 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 MIR372-201ENST00000362225 67 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 MIR126-201ENST00000362291 85 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 RNU1-14P-201ENST00000362759 152 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 Y_RNA.253-201ENST00000364562 112 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 Y_RNA.634-201ENST00000364811 113 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CITED4Q96RK1 MIR562-201ENST00000384894 95 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 SNORA11.1-201ENST00000408133 129 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 AL356095.1-201ENST00000417217 199 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 CST2P1-201ENST00000425770 87 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.17□□□□□ -1.9
CITED4Q96RK1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.17□□□□□ -1.9
CITED4Q96RK1 RNU7-94P-201ENST00000459576 63 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 RNA5SP153-201ENST00000516498 76 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 AL365222.1-201ENST00000614661 98 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 TUG1_4.1-201ENST00000619464 181 ntBASIC3.17□□□□□ -1.9
CITED4Q96RK1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CITED4Q96RK1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CITED4Q96RK1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.17□□□□□ -1.9
CITED4Q96RK1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CITED4Q96RK1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CITED4Q96RK1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CITED4Q96RK1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
CITED4Q96RK1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CITED4Q96RK1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CITED4Q96RK1 RNU6-1164P-201ENST00000364428 107 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 SNORA70.4-201ENST00000365509 134 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 RNU6-597P-201ENST00000365620 102 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 Y_RNA.584-201ENST00000391090 114 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 AP001328.1-201ENST00000528550 176 ntBASIC3.16□□□□□ -1.9
CITED4Q96RK1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.16□□□□□ -1.9
CITED4Q96RK1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CITED4Q96RK1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CITED4Q96RK1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CITED4Q96RK1 MIR539-201ENST00000365690 78 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 MIR200C-201ENST00000384980 68 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
CITED4Q96RK1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.15□□□□□ -1.91
CITED4Q96RK1 RNU7-197P-201ENST00000458836 62 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms