Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SNORA14A-201ENST00000364773 135 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNY1P5-201ENST00000383890 115 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.398-201ENST00000383952 99 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNU2-2P-201ENST00000410396 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 HMGN2P38-201ENST00000423806 265 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AL606753.1-201ENST00000427435 87 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 TMSB4XP3-201ENST00000445144 114 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AL049873.1-201ENST00000480540 376 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNU1-104P-201ENST00000517280 175 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AC136628.3-201ENST00000521868 290 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNU2-4P-201ENST00000606190 192 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.15-201ENST00000611544 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.16-201ENST00000613119 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.12-201ENST00000613778 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.9-201ENST00000615427 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.11-201ENST00000616345 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.2-201ENST00000616535 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.3-201ENST00000617785 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.19-201ENST00000618602 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 RNU2-1-201ENST00000618664 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.6-201ENST00000619225 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.5-201ENST00000619465 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 U2.10-201ENST00000620268 191 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PDLIM2Q96JY6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.7-201ENST00000362352 102 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 RNU6-801P-201ENST00000364087 105 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 RNU6-717P-201ENST00000459076 104 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 RN7SKP132-201ENST00000516001 208 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 SUMO2P18-201ENST00000518873 252 ntBASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM2Q96JY6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PDLIM2Q96JY6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
PDLIM2Q96JY6 RNU4-17P-201ENST00000365598 141 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 Y_RNA.441-201ENST00000384123 112 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 MIR518C-201ENST00000384822 101 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 MIR613-201ENST00000385248 95 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 RNU6-710P-201ENST00000410424 105 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 RPS20P10-201ENST00000451209 253 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 RPL17P51-201ENST00000605218 238 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 AC108706.1-201ENST00000611053 297 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 U6.115-201ENST00000636045 103 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 AC010329.5-201ENST00000623497 2174 ntBASIC2.58□□□□□ -2
PDLIM2Q96JY6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
PDLIM2Q96JY6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PDLIM2Q96JY6 AC134026.1-201ENST00000623249 2239 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 Y_RNA.182-201ENST00000363880 111 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 SNORD32B-201ENST00000364460 84 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 RNA5SP240-201ENST00000365355 128 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 MIR29B2-201ENST00000385055 81 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 SNORA26.5-201ENST00000391215 123 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 RNU6-855P-201ENST00000410395 104 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AL135790.2-201ENST00000437701 267 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM2Q96JY6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM2Q96JY6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM2Q96JY6 MIR4448-201ENST00000584360 86 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AC004832.4-201ENST00000608952 331 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AL078604.3-201ENST00000615580 211 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 UCA1.1-201ENST00000620952 75 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 AC008873.1-201ENST00000625051 138 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
PDLIM2Q96JY6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM2Q96JY6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDLIM2Q96JY6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
PDLIM2Q96JY6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM2Q96JY6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDLIM2Q96JY6 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
PDLIM2Q96JY6 Y_RNA.272-201ENST00000364696 102 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms