| TMEM41A | Q96HV5 | Y_RNA.243-201 | ENST00000364481 | 109 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | C6orf10-201 | ENST00000375007 | 2125 nt | APPRIS ALT2 TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.446-201 | ENST00000384178 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | Y_RNA.570-201 | ENST00000384750 | 101 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR520A-201 | ENST00000384862 | 85 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR873-201 | ENST00000401120 | 77 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPL23AP36-201 | ENST00000413895 | 458 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPS15AP28-201 | ENST00000435088 | 386 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL121890.1-201 | ENST00000435457 | 205 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC108488.2-201 | ENST00000438485 | 421 nt | APPRIS P1 TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNA5SP20-201 | ENST00000515976 | 84 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU6-397P-201 | ENST00000516226 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | RNU7-110P-201 | ENST00000516891 | 62 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AL590808.1-201 | ENST00000618696 | 141 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | AC005336.3-201 | ENST00000623833 | 2679 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | PTPN22-206 | ENST00000525799 | 2118 nt | TSL 1 (best) BASIC | 2.15 | □□□□□ -2.06 | | |
| TMEM41A | Q96HV5 | SNORA27.1-201 | ENST00000362604 | 124 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-324P-201 | ENST00000363957 | 106 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNA5SP100-201 | ENST00000410903 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNA5SP59-201 | ENST00000410922 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC010154.1-201 | ENST00000425857 | 269 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC005042.3-201 | ENST00000453230 | 174 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC113383.1-204 | ENST00000507060 | 552 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC005828.6-201 | ENST00000606610 | 232 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL021879.1-201 | ENST00000611756 | 288 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | PART1_1.1-201 | ENST00000611761 | 217 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | PTPN22-203 | ENST00000460620 | 1794 nt | TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.152-201 | ENST00000363578 | 100 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-937P-201 | ENST00000384325 | 106 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-21P-201 | ENST00000384710 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL590004.1-201 | ENST00000405321 | 300 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-130P-201 | ENST00000411112 | 103 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC245047.4-201 | ENST00000433189 | 144 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | IKZF2-209 | ENST00000442445 | 551 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU7-99P-201 | ENST00000516271 | 62 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORA40.15-201 | ENST00000516884 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC006504.6-201 | ENST00000590142 | 199 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | CEP57L1-201 | ENST00000359793 | 2515 nt | APPRIS P3 TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORD115-30-201 | ENST00000364117 | 82 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.331-201 | ENST00000365267 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORD63-201 | ENST00000384262 | 68 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-301P-201 | ENST00000384277 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU2-20P-201 | ENST00000410425 | 191 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC009310.1-201 | ENST00000414414 | 451 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | CPHL1P-203 | ENST00000471823 | 523 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-764P-201 | ENST00000516396 | 105 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU7-172P-201 | ENST00000517125 | 64 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RPL21P9-201 | ENST00000556149 | 474 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC012435.2-201 | ENST00000562869 | 361 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC099850.3-201 | ENST00000577678 | 321 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC113195.1-201 | ENST00000579952 | 141 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | MIR4423-201 | ENST00000580922 | 80 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL355297.3-201 | ENST00000604082 | 446 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.812-201 | ENST00000610788 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.784-201 | ENST00000613803 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.787-201 | ENST00000616522 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.780-201 | ENST00000617336 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.801-201 | ENST00000619005 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | Y_RNA.183-201 | ENST00000363882 | 113 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNA5SP126-201 | ENST00000365092 | 109 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AL031003.1-201 | ENST00000404229 | 172 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-1046P-201 | ENST00000516538 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| TMEM41A | Q96HV5 | RNU6-897P-201 | ENST00000517135 | 105 nt | BASIC | 2.12 | □□□□□ -2.07 | | |