Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NUP43Q8NFH3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3□□□□□ -1.93
NUP43Q8NFH3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
NUP43Q8NFH3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NUP43Q8NFH3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-597P-201ENST00000365620 102 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-418P-201ENST00000384035 107 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNA5SP496-201ENST00000391240 109 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNA5SP511-201ENST00000410487 115 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-498P-201ENST00000459468 107 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-919P-201ENST00000516731 104 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 RNU6-586P-201ENST00000517265 104 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AP001328.1-201ENST00000528550 176 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC015720.1-201ENST00000565251 277 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 MIR2682-201ENST00000580305 110 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC006435.5-201ENST00000624486 112 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NUP43Q8NFH3 AC009487.4-201ENST00000624969 3585 ntBASIC2.99□□□□□ -1.93
NUP43Q8NFH3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 CYCSP49-201ENST00000420810 319 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 RPL30P4-201ENST00000429309 333 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 RNU6-948P-201ENST00000516374 107 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 RNU2-56P-201ENST00000516826 190 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 MIR378D2-201ENST00000580636 98 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 U7.2-201ENST00000607576 63 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP43Q8NFH3 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
NUP43Q8NFH3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNU4-41P-201ENST00000364426 143 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNU6-1325P-201ENST00000364905 105 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNU6-915P-201ENST00000364943 103 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNU6-484P-201ENST00000384016 107 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AL512604.1-201ENST00000404812 257 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 RNA5SP293-201ENST00000410527 113 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 BX510359.1-201ENST00000456973 237 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AC006483.1-201ENST00000487308 313 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AC013412.1-201ENST00000610687 192 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 MIR1248-201ENST00000629190 106 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP43Q8NFH3 AC103988.1-201ENST00000566382 2177 ntBASIC2.97□□□□□ -1.93
NUP43Q8NFH3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
NUP43Q8NFH3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RNU6-834P-201ENST00000362367 110 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RNU6-978P-201ENST00000364371 103 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 MICF-203ENST00000432679 129 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RAC1P5-201ENST00000512182 576 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RNU6-197P-201ENST00000516680 100 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 RNU6-965P-201ENST00000516721 96 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 AC093331.1-201ENST00000521474 169 ntBASIC2.96□□□□□ -1.94
NUP43Q8NFH3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP43Q8NFH3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NUP43Q8NFH3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP43Q8NFH3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP43Q8NFH3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AC008134.1-201ENST00000420943 193 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP43Q8NFH3 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 RNU7-107P-201ENST00000459121 61 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AC090515.1-201ENST00000465295 476 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AC068657.1-201ENST00000520807 306 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AL929325.1-201ENST00000603096 117 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 AL049861.1-201ENST00000603130 150 ntBASIC2.95□□□□□ -1.94
NUP43Q8NFH3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP43Q8NFH3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms