Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 Y_RNA.95-201ENST00000363079 95 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 Y_RNA.96-201ENST00000363092 109 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 RNU6-750P-201ENST00000390946 107 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AL161651.1-201ENST00000440882 223 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 RPS3P1-201ENST00000456781 192 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 RN7SL601P-201ENST00000471221 293 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 RNU7-172P-201ENST00000517125 64 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AC004486.1-201ENST00000546846 233 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AC073413.2-201ENST00000604332 360 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 AP000553.6-201ENST00000641242 118 ntBASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS3Q8IXF0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 IPO8P1-201ENST00000455509 3109 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RNU1-33P-201ENST00000364249 162 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RNU6-335P-201ENST00000364563 113 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 MIR518F-201ENST00000384973 87 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RN7SKP177-201ENST00000410567 355 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 SNORA7.5-201ENST00000410672 110 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 Z92545.1-201ENST00000411782 234 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 SNRPGP13-201ENST00000442212 177 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RNU1-131P-201ENST00000458943 161 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RN7SKP282-201ENST00000516824 299 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 RNU6-1006P-201ENST00000516998 103 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 MIR4753-201ENST00000585119 83 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 SNRPGP15-201ENST00000600149 222 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 HSPE1P19-201ENST00000603327 295 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 MIR3199-2-201ENST00000636243 86 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 AC004944.1-201ENST00000517807 3059 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
NPAS3Q8IXF0 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 RNU6-363P-201ENST00000362895 105 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 RNU4-67P-201ENST00000364569 141 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 RNU4-16P-201ENST00000364737 141 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 Y_RNA.545-201ENST00000384652 105 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 SNORA1.3-201ENST00000384676 136 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 AL513477.1-202ENST00000417061 214 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 AC004223.1-201ENST00000479840 271 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 RPL32P34-201ENST00000486380 400 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 AC064859.1-201ENST00000624741 174 ntBASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS3Q8IXF0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 MIR1283-1-201ENST00000408494 87 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 AC010099.1-201ENST00000455434 375 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 RNU6-221P-201ENST00000459541 99 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 SNORD116-26-201ENST00000516006 96 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 MIR449C-201ENST00000516047 92 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 RNU6-928P-201ENST00000516876 104 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 AC005000.2-201ENST00000605468 310 ntBASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
NPAS3Q8IXF0 AC005336.3-201ENST00000623833 2679 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AL035398.1-201ENST00000430869 322 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 RNU7-14P-201ENST00000459331 62 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AP001486.1-201ENST00000463339 476 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AL360157.1-201ENST00000565962 87 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS3Q8IXF0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms