Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR2682-201ENST00000580305 110 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 uc_338.1-201ENST00000612113 180 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 SNORA38-201ENST00000363946 132 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 RNU6-969P-201ENST00000383900 105 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 SNORA7.4-201ENST00000384249 137 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 MT-TT-201ENST00000387460 66 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 Z98941.1-201ENST00000407764 100 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 RPL23AP94-201ENST00000512518 302 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 RNU6-56P-201ENST00000516986 93 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 PRELID2P1-201ENST00000552837 301 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 AC112693.2-201ENST00000556538 232 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 AL360157.1-201ENST00000565962 87 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.802-201ENST00000614892 130 ntBASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS4Q8IUM7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 MIR539-201ENST00000365690 78 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 MIR1253-201ENST00000408273 105 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 RPL23AP7-203ENST00000449021 469 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 AC010531.2-201ENST00000465012 153 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 MIR2114-201ENST00000516645 80 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 AC025647.1-201ENST00000517879 253 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 AC093331.1-201ENST00000521474 169 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 AC090115.4-201ENST00000609970 188 ntBASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS4Q8IUM7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNU6-407P-201ENST00000365280 104 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNU6-80P-201ENST00000384195 107 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 SNORA20B-201ENST00000384220 132 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNU6-376P-201ENST00000384731 106 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 MIR592-201ENST00000384959 97 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNU2-52P-201ENST00000410680 190 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 AC107083.1-201ENST00000439643 279 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 HSPE1P13-201ENST00000451143 297 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 RNU7-197P-201ENST00000458836 62 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 SNORA31.26-201ENST00000517250 137 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 MIR7106-201ENST00000612419 65 ntBASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NPAS4Q8IUM7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 ZNF702P-202ENST00000434269 1966 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 SNORA27.1-201ENST00000362604 124 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 Y_RNA.99-201ENST00000363138 105 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 RNA5SP322-201ENST00000363617 119 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 MIR616-201ENST00000385293 97 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 SNORD37.2-201ENST00000391075 66 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 AL355497.1-201ENST00000406262 551 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 EDDM3CP-201ENST00000415977 425 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 AL121890.1-201ENST00000435457 205 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 AL121914.1-201ENST00000450188 156 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 SNORD65B-201ENST00000459126 73 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 RNU6-561P-201ENST00000516222 102 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 AC026271.5-201ENST00000577873 130 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 MIR4738-201ENST00000579134 87 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS4Q8IUM7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 RNU6-460P-201ENST00000391158 108 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 RNU2-48P-201ENST00000410694 191 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 MTCO1P44-201ENST00000441935 243 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AC025750.2-201ENST00000442609 450 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 RNU7-141P-201ENST00000459304 62 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AC092991.1-201ENST00000477176 376 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 RNU4-57P-201ENST00000515980 135 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 RNU6-856P-201ENST00000516959 98 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AL033523.1-201ENST00000605153 153 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AC011603.4-201ENST00000611325 277 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 TUG1_4.1-201ENST00000619464 181 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AL137790.1-201ENST00000634283 177 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AC244205.2-202ENST00000635781 342 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 MIR622-201ENST00000638396 96 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms