Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-948P-201ENST00000516374 107 ntBASIC3.61□□□□□ -1.83
USPL1Q5W0Q7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USPL1Q5W0Q7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USPL1Q5W0Q7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USPL1Q5W0Q7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USPL1Q5W0Q7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 MIR367-201ENST00000362299 68 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU6-151P-201ENST00000364158 107 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU6-969P-201ENST00000383900 105 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 SNORA20B-201ENST00000384220 132 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 AL121890.1-201ENST00000435457 205 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 HSPE1P21-201ENST00000438283 308 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 SEM1P1-201ENST00000506694 209 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU7-115P-201ENST00000516433 55 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 SNORD116-25-201ENST00000516517 92 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU6-62P-201ENST00000516526 102 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU2-34P-201ENST00000516534 121 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 RNU7-116P-201ENST00000516940 62 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 MIR548AY-201ENST00000617669 107 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 AC091895.1-201ENST00000624494 256 ntBASIC3.6□□□□□ -1.83
USPL1Q5W0Q7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AC068700.1-201ENST00000565862 3754 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 RNY3P5-201ENST00000384127 102 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 RNU6-959P-201ENST00000384671 107 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 RNU6-131P-201ENST00000391144 107 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AL355796.1-201ENST00000406706 323 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AC016925.1-201ENST00000458303 298 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 RPS26P55-201ENST00000471178 356 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 MIR548X2-201ENST00000579776 100 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 DNAJC19P2-201ENST00000593340 302 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AP003357.1-201ENST00000604497 148 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AC002064.3-201ENST00000623448 346 ntBASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
USPL1Q5W0Q7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
USPL1Q5W0Q7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
USPL1Q5W0Q7 AC110774.1-201ENST00000623567 2018 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU1-72P-201ENST00000362976 153 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU6-944P-201ENST00000364023 107 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU4-10P-201ENST00000364383 140 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 MIR518C-201ENST00000384822 101 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 AL138827.1-201ENST00000402666 306 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNA5SP274-201ENST00000410484 108 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 AC008134.1-201ENST00000420943 193 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU6-498P-201ENST00000459468 107 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 AC010409.1-201ENST00000487382 476 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU1-41P-201ENST00000516161 162 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU6-479P-201ENST00000516348 105 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 RNU1-48P-201ENST00000516400 162 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 SCARNA3-201ENST00000517097 143 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 AC004832.5-201ENST00000608677 401 ntBASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USPL1Q5W0Q7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 RNU6-859P-201ENST00000362728 107 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 AL513328.1-201ENST00000446460 224 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 SNORD65B-201ENST00000459126 73 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 RN7SL633P-201ENST00000488974 297 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 MIR449C-201ENST00000516047 92 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 RNU6-1007P-201ENST00000516586 107 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 AC022616.8-201ENST00000533569 253 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USPL1Q5W0Q7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 U8.7-201ENST00000364940 136 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 RNU6-417P-201ENST00000384712 107 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 RNU2-51P-201ENST00000410708 197 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 RPS29P12-201ENST00000460178 152 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 YWHAEP4-201ENST00000505390 198 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 SCARNA8-201ENST00000515924 131 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms