Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTND2P29-201ENST00000438595 412 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 RAC1P9-201ENST00000604990 392 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 AC006435.5-201ENST00000624486 112 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 AC099654.10-201ENST00000640395 161 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CLDN2P57739 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 RNA5SP99-201ENST00000364020 114 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 SNORA63C-201ENST00000364578 129 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLDN2P57739 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC016909.1-201ENST00000415916 166 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 SCARNA15.1-201ENST00000516384 125 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 SNORA40.15-201ENST00000516884 107 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 RNU6-897P-201ENST00000517135 105 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 Y_RNA.720-201ENST00000517166 92 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC131281.1-201ENST00000522984 164 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC006380.1-201ENST00000603598 186 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC012640.5-201ENST00000623897 319 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 AC091932.3-201ENST00000624223 323 ntBASIC2.02□□□□□ -2.09
CLDN2P57739 snoU2-30.2-201ENST00000362805 70 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 Y_RNA.143-201ENST00000363520 106 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 Y_RNA.153-201ENST00000363615 91 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU6-454P-201ENST00000364292 107 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU2-54P-201ENST00000410299 190 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC113618.1-201ENST00000416747 285 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN2P57739 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC010598.1-201ENST00000510378 103 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU6-1143P-201ENST00000516125 104 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU6-397P-201ENST00000516226 104 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU6-1041P-201ENST00000516254 102 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 RNU2-12P-201ENST00000517216 168 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC055872.1-201ENST00000570978 278 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC022441.3-201ENST00000605737 136 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 AC005828.6-201ENST00000606610 232 ntBASIC2.01□□□□□ -2.09
CLDN2P57739 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN2P57739 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN2P57739 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN2P57739 SNORD114-7-201ENST00000362520 77 ntBASIC2□□□□□ -2.09
CLDN2P57739 Y_RNA.162-201ENST00000363683 102 ntBASIC2□□□□□ -2.09
CLDN2P57739 Y_RNA.243-201ENST00000364481 109 ntBASIC2□□□□□ -2.09
CLDN2P57739 RNU6-1175P-201ENST00000365200 107 ntBASIC2□□□□□ -2.09
CLDN2P57739 MIR515-2-201ENST00000384883 83 ntBASIC2□□□□□ -2.09
CLDN2P57739 MIR515-1-201ENST00000384884 83 ntBASIC2□□□□□ -2.09
CLDN2P57739 MIR597-201ENST00000384968 97 ntBASIC2□□□□□ -2.09
CLDN2P57739 U8.13-201ENST00000390842 128 ntBASIC2□□□□□ -2.09
CLDN2P57739 RPL23AP36-201ENST00000413895 458 ntBASIC2□□□□□ -2.09
CLDN2P57739 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2□□□□□ -2.09
CLDN2P57739 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
CLDN2P57739 SNORD65B-201ENST00000459126 73 ntBASIC2□□□□□ -2.09
CLDN2P57739 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
CLDN2P57739 AC010655.3-201ENST00000478818 450 ntBASIC2□□□□□ -2.09
CLDN2P57739 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN2P57739 SNORA31.11-201ENST00000516528 139 ntBASIC2□□□□□ -2.09
CLDN2P57739 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
CLDN2P57739 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2□□□□□ -2.09
CLDN2P57739 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2□□□□□ -2.09
CLDN2P57739 MIR5002-201ENST00000584713 97 ntBASIC2□□□□□ -2.09
CLDN2P57739 AC011373.1-201ENST00000607270 237 ntBASIC2□□□□□ -2.09
CLDN2P57739 U1.36-201ENST00000620684 176 ntBASIC2□□□□□ -2.09
CLDN2P57739 U6.115-201ENST00000636045 103 ntBASIC2□□□□□ -2.09
CLDN2P57739 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN2P57739 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN2P57739 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN2P57739 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN2P57739 Y_RNA.101-201ENST00000363154 102 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 RNU6-271P-201ENST00000363858 105 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 Y_RNA.210-201ENST00000364161 110 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 CST2P1-201ENST00000425770 87 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 HMGN2P34-201ENST00000437647 269 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN2P57739 AC005042.3-201ENST00000453230 174 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 MTND5P22-201ENST00000458380 195 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 MRPS35P2-201ENST00000508242 191 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 AL137100.2-201ENST00000555786 315 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN2P57739 AL360085.1-201ENST00000604713 532 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
CLDN2P57739 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN2P57739 Y_RNA.446-201ENST00000384178 104 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 RNU6-937P-201ENST00000384325 106 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 SNORA80E-201ENST00000384744 137 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 SNORA48.1-201ENST00000390879 135 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 AL117342.1-201ENST00000404861 406 ntBASIC1.98□□□□□ -2.09
CLDN2P57739 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN2P57739 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 1728.7 ms