Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EBAG9P1-201ENST00000418955 543 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 AC060773.1-201ENST00000421698 310 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 SSXP5-201ENST00000443473 287 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.86□□□□□ -1.95
GFRA1P56159 RNU6-789P-201ENST00000517105 102 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.86□□□□□ -1.95
GFRA1P56159 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.86□□□□□ -1.95
GFRA1P56159 AC015720.1-201ENST00000565251 277 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
GFRA1P56159 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA1P56159 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA1P56159 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA1P56159 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
GFRA1P56159 RNY1P5-201ENST00000383890 115 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 Y_RNA.572-201ENST00000384757 98 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 EDDM3CP-201ENST00000415977 425 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.85□□□□□ -1.95
GFRA1P56159 SEPT7P4-201ENST00000437076 306 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.85□□□□□ -1.95
GFRA1P56159 AC245047.8-201ENST00000456455 284 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 RNU6-437P-201ENST00000459408 95 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 AC011406.1-201ENST00000512440 370 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 U6.73-201ENST00000619194 103 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 MIR622-201ENST00000638396 96 ntBASIC2.85□□□□□ -1.95
GFRA1P56159 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
GFRA1P56159 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.85□□□□□ -1.95
GFRA1P56159 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
GFRA1P56159 snoU2-30.2-201ENST00000362805 70 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 Y_RNA.229-201ENST00000364347 113 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.84□□□□□ -1.95
GFRA1P56159 RNU6-160P-201ENST00000384591 107 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 RNU11-5P-201ENST00000391216 129 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 RNU6-383P-201ENST00000410864 94 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 HMGN1P18-201ENST00000457642 277 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 RN7SL442P-201ENST00000473804 320 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 SCARNA20.6-201ENST00000517251 106 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 MIR4325-201ENST00000583049 90 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 UBL5P2-201ENST00000583788 219 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 MTND1P7-201ENST00000632801 297 ntBASIC2.84□□□□□ -1.95
GFRA1P56159 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
GFRA1P56159 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
GFRA1P56159 RNU6-525P-201ENST00000363685 104 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 Y_RNA.398-201ENST00000383952 99 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 RNU6-187P-201ENST00000384139 106 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 SNORA72-201ENST00000384339 132 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 RNU6-136P-201ENST00000384663 107 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 RNU6-417P-201ENST00000384712 107 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 AL353689.1-201ENST00000438895 199 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 AC245102.2-201ENST00000448956 180 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.83□□□□□ -1.96
GFRA1P56159 RNU7-200P-201ENST00000516105 62 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 AC109810.1-201ENST00000534066 224 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 LARP7P3-201ENST00000579888 337 ntBASIC2.83□□□□□ -1.96
GFRA1P56159 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GFRA1P56159 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
GFRA1P56159 RNU4-84P-201ENST00000364200 139 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 SNORD116-18-201ENST00000383961 92 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RNU6-1072P-201ENST00000384703 107 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RNU6-443P-201ENST00000384780 107 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RNU6-1228P-201ENST00000391014 107 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RPS15AP28-201ENST00000435088 386 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RNU1-131P-201ENST00000458943 161 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RPS27P29-201ENST00000463110 252 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 SCARNA8-201ENST00000515924 131 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 RNU6-453P-201ENST00000516819 85 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 MTND5P41-201ENST00000517498 206 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 MIR4431-201ENST00000579990 94 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 AC007229.1-201ENST00000590455 412 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 AC093732.2-201ENST00000607950 274 ntBASIC2.82□□□□□ -1.96
GFRA1P56159 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
GFRA1P56159 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 RNU6-674P-201ENST00000363831 107 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 RNU6-449P-201ENST00000383914 107 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 SNORD15B-201ENST00000384714 146 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 Y_RNA.580-201ENST00000391004 95 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AL512604.1-201ENST00000404812 257 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 RNU6-1186P-201ENST00000410429 97 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AC092185.1-201ENST00000491371 97 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 RNU6-1041P-201ENST00000516254 102 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 RN7SKP282-201ENST00000516824 299 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AC026271.5-201ENST00000577873 130 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AL353149.1-201ENST00000610667 244 ntBASIC2.81□□□□□ -1.96
GFRA1P56159 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.81□□□□□ -1.96
GFRA1P56159 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA1P56159 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RNU4-41P-201ENST00000364426 143 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RNU6-805P-201ENST00000365643 106 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms