Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 IFITM8P-201ENST00000522529 394 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 AC006349.1-201ENST00000555526 235 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 AC007179.3-201ENST00000604976 235 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 MIR6867-201ENST00000610636 67 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 SNORD3E-202ENST00000627253 216 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 MIR6841-201ENST00000637129 72 ntBASIC4.55□□□□□ -1.68
NUBP1P53384 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.55□□□□□ -1.68
NUBP1P53384 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
NUBP1P53384 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
NUBP1P53384 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUBP1P53384 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUBP1P53384 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUBP1P53384 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NUBP1P53384 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NUBP1P53384 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.54□□□□□ -1.68
NUBP1P53384 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUBP1P53384 RNU6-1163P-201ENST00000364516 107 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 MIR659-201ENST00000384963 97 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 MIR519C-201ENST00000385053 87 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 RN7SKP192-201ENST00000411291 327 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.54□□□□□ -1.68
NUBP1P53384 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.54□□□□□ -1.68
NUBP1P53384 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
NUBP1P53384 MIR1270-201ENST00000459320 83 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 AC025554.1-201ENST00000505641 188 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 RNU6-711P-201ENST00000517255 106 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 AC019176.2-201ENST00000611579 315 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 U7.4-201ENST00000614961 63 ntBASIC4.54□□□□□ -1.68
NUBP1P53384 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NUBP1P53384 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.54□□□□□ -1.68
NUBP1P53384 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUBP1P53384 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUBP1P53384 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUBP1P53384 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.53□□□□□ -1.68
NUBP1P53384 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
NUBP1P53384 RNU6-862P-201ENST00000362804 105 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 SNORA32-201ENST00000384072 121 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 MIR592-201ENST00000384959 97 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 STAG3L5P-204ENST00000443759 179 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 RNU7-67P-201ENST00000459003 62 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 RNU7-2P-201ENST00000516096 62 ntBASIC4.53□□□□□ -1.68
NUBP1P53384 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.53□□□□□ -1.68
NUBP1P53384 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NUBP1P53384 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.52□□□□□ -1.69
NUBP1P53384 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 SNORD114-6-201ENST00000364393 72 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 MIR491-201ENST00000384877 84 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 NDUFB4P4-201ENST00000404822 243 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 RPS29P28-201ENST00000446439 141 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 AC006539.3-201ENST00000454258 129 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.52□□□□□ -1.69
NUBP1P53384 AC093249.4-201ENST00000564755 259 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 AL138721.1-201ENST00000616756 179 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.52□□□□□ -1.69
NUBP1P53384 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 OTUD4P1-201ENST00000237841 3067 ntBASIC4.52□□□□□ -1.69
NUBP1P53384 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
NUBP1P53384 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NUBP1P53384 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUBP1P53384 MAPK10-286ENST00000641208 8747 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 Y_RNA.247-201ENST00000364500 92 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 RNU6-524P-201ENST00000384270 107 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 SNORA59A-201ENST00000459326 152 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 RN7SL600P-201ENST00000581811 299 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 AC103810.6-201ENST00000606708 136 ntBASIC4.51□□□□□ -1.69
NUBP1P53384 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUBP1P53384 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.51□□□□□ -1.69
NUBP1P53384 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUBP1P53384 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.51□□□□□ -1.69
NUBP1P53384 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUBP1P53384 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUBP1P53384 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUBP1P53384 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
NUBP1P53384 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NUBP1P53384 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
NUBP1P53384 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 RNU6-1229P-201ENST00000364295 107 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 Y_RNA.370-201ENST00000365589 108 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 U8.11-201ENST00000384699 133 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 MIR34B-201ENST00000385076 84 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 RPL23AP48-201ENST00000406913 488 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 MIR1271-201ENST00000408537 86 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 U8.18-201ENST00000459285 133 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 SEM1P1-201ENST00000506694 209 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms