Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNU6-397P-201ENST00000516226 104 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 RPL17P51-201ENST00000605218 238 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
SLC6A12P48065 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SLC6A12P48065 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC6A12P48065 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SLC6A12P48065 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC6A12P48065 RNU1-58P-201ENST00000362413 163 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 Y_RNA.512-201ENST00000384518 102 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 RNU6-1109P-201ENST00000391187 107 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 HMGN2P9-201ENST00000476875 229 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 AC025465.3-201ENST00000510570 311 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
SLC6A12P48065 AP005660.1-201ENST00000522972 293 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 SNORD11B-201ENST00000607707 90 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC6A12P48065 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC6A12P48065 AC068205.3-201ENST00000636385 468 ntBASIC1.87□□□□□ -2.11
SLC6A12P48065 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
SLC6A12P48065 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU6-545P-201ENST00000362681 104 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU5F-3P-201ENST00000363767 117 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 Y_RNA.183-201ENST00000363882 113 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 MIR597-201ENST00000384968 97 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 Y_RNA.595-201ENST00000410403 105 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC6A12P48065 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AC005002.2-201ENST00000438228 269 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 PCNPP5-201ENST00000452246 481 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AC016925.1-201ENST00000458303 298 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU7-14P-201ENST00000459331 62 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RPS23P5-201ENST00000495419 428 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU6-966P-201ENST00000516479 104 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU5F-4P-201ENST00000516581 114 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 RNU1-117P-201ENST00000517041 158 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC6A12P48065 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC6A12P48065 AC018448.1-201ENST00000552843 316 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 PRR13P7-201ENST00000605538 430 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC6A12P48065 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
SLC6A12P48065 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
SLC6A12P48065 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 MIR410-201ENST00000362222 80 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 Y_RNA.222-201ENST00000364264 102 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 Y_RNA.574-201ENST00000384766 95 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 MIR586-201ENST00000385035 97 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC6A12P48065 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC6A12P48065 AL357139.1-201ENST00000407792 426 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 MIR320B2-201ENST00000408479 138 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 RAB28P5-201ENST00000427490 651 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 MTCYBP9-201ENST00000431021 303 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 UQCRBP2-201ENST00000447827 297 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 HMGN2P18-201ENST00000450680 270 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 LINC01399-202ENST00000458450 244 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 snoU13.23-201ENST00000458863 104 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 MTCO2P24-201ENST00000515611 426 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 AC074133.1-201ENST00000515696 183 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 RNU6-408P-201ENST00000515910 100 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 RNU6-237P-201ENST00000515985 71 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 RNU6-635P-201ENST00000516651 102 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 AC008269.2-201ENST00000561915 1105 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC6A12P48065 MIR4300-201ENST00000581016 96 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
SLC6A12P48065 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC6A12P48065 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SLC6A12P48065 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SLC6A12P48065 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SLC6A12P48065 Y_RNA.47-201ENST00000362697 108 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 Y_RNA.64-201ENST00000362845 102 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 Y_RNA.143-201ENST00000363520 106 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 SNORD31B-201ENST00000364977 69 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 Y_RNA.332-201ENST00000365271 113 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 Y_RNA.439-201ENST00000384119 94 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 SNORD115-46-201ENST00000390982 71 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.84□□□□□ -2.11
SLC6A12P48065 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC6A12P48065 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC6A12P48065 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
SLC6A12P48065 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC6A12P48065 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.84□□□□□ -2.11
SLC6A12P48065 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 298.7 ms