Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC131281.1-201ENST00000522984 164 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC008737.2-201ENST00000599446 118 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.77□□□□□ -2.13
NKX2-1P43699 AL773524.1-201ENST00000614065 229 ntBASIC1.77□□□□□ -2.13
NKX2-1P43699 RNU6-1240P-201ENST00000365155 104 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 SNORA11.4-201ENST00000408823 129 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 RNA5SP501-201ENST00000410990 112 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 RNU6-1199P-201ENST00000411249 104 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC009963.1-201ENST00000417265 157 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.76□□□□□ -2.13
NKX2-1P43699 YWHAEP4-201ENST00000505390 198 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 RNA5SP364-201ENST00000516938 78 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AP005660.1-201ENST00000522972 293 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC136932.1-201ENST00000574771 208 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 MIR4287-201ENST00000579398 78 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.76□□□□□ -2.13
NKX2-1P43699 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC005176.2-201ENST00000596933 147 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.76□□□□□ -2.13
NKX2-1P43699 AC004467.1-201ENST00000615678 330 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AC127459.3-201ENST00000624328 466 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 AL136360.1-201ENST00000503377 1900 ntBASIC1.76□□□□□ -2.13
NKX2-1P43699 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
NKX2-1P43699 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
NKX2-1P43699 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 RNA5SP160-201ENST00000364866 120 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 RNU6-1105P-201ENST00000384774 107 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 AL117342.1-201ENST00000404861 406 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 RPL23AP36-201ENST00000413895 458 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 ELOCP20-201ENST00000422460 345 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 HMGN2P38-201ENST00000423806 265 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 SEPT14P8-201ENST00000508026 178 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 RNA5SP200-201ENST00000516360 103 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 MIR514B-201ENST00000516774 80 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 RNU1-117P-201ENST00000517041 158 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 U6.115-201ENST00000636045 103 ntBASIC1.75□□□□□ -2.13
NKX2-1P43699 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
NKX2-1P43699 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
NKX2-1P43699 RNU1-96P-201ENST00000364163 162 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 RNU6-450P-201ENST00000364654 107 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MIR515-2-201ENST00000384883 83 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MIR515-1-201ENST00000384884 83 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MIR221-201ENST00000385135 110 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 Y_RNA.581-201ENST00000391017 97 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC016909.1-201ENST00000415916 166 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC060773.1-201ENST00000421698 310 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX2-1P43699 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX2-1P43699 AL118496.2-201ENST00000448300 230 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC016717.1-201ENST00000448918 286 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 LINC01399-202ENST00000458450 244 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MRPS35P2-201ENST00000508242 191 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC011406.1-201ENST00000512440 370 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MTCO2P24-201ENST00000515611 426 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 MIR4300-201ENST00000581016 96 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 SNORD113-5-201ENST00000607261 78 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 AC022513.1-201ENST00000624512 117 ntBASIC1.74□□□□□ -2.13
NKX2-1P43699 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.74□□□□□ -2.13
NKX2-1P43699 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX2-1P43699 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.73□□□□□ -2.13
NKX2-1P43699 Y_RNA.101-201ENST00000363154 102 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 SNORD115-30-201ENST00000364117 82 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 Y_RNA.210-201ENST00000364161 110 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 Y_RNA.446-201ENST00000384178 104 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 snosnR66.1-201ENST00000391095 99 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 RNU2-40P-201ENST00000410833 196 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 CST2P1-201ENST00000425770 87 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX2-1P43699 AC005042.3-201ENST00000453230 174 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 SNORD65B-201ENST00000459126 73 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 RNU6-496P-201ENST00000516145 99 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-1P43699 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-1P43699 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX2-1P43699 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 MIR3935-201ENST00000583472 104 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AC010900.2-201ENST00000604508 210 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AC013412.1-201ENST00000610687 192 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AC011476.5-201ENST00000615594 130 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 AC091932.3-201ENST00000624223 323 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 SCARNA15.3-201ENST00000626315 122 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 SCARNA4.1-201ENST00000628597 123 ntBASIC1.73□□□□□ -2.13
NKX2-1P43699 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-1P43699 SNORD81.1-201ENST00000363064 77 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms