Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 Y_RNA.267-201ENST00000364679 109 ntBASIC3.6□□□□□ -1.83
GPC1P35052 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
GPC1P35052 MIR802-201ENST00000390235 94 ntBASIC3.6□□□□□ -1.83
GPC1P35052 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
GPC1P35052 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.6□□□□□ -1.83
GPC1P35052 AC244505.4-201ENST00000434905 287 ntBASIC3.6□□□□□ -1.83
GPC1P35052 RPS15AP28-201ENST00000435088 386 ntBASIC3.6□□□□□ -1.83
GPC1P35052 SSXP5-201ENST00000443473 287 ntBASIC3.6□□□□□ -1.83
GPC1P35052 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC1P35052 SCGB1D5P-201ENST00000515134 247 ntBASIC3.6□□□□□ -1.83
GPC1P35052 SCARNA17.1-201ENST00000516211 143 ntBASIC3.6□□□□□ -1.83
GPC1P35052 RNU6-1146P-201ENST00000516282 102 ntBASIC3.6□□□□□ -1.83
GPC1P35052 SCARNA17.2-201ENST00000516334 143 ntBASIC3.6□□□□□ -1.83
GPC1P35052 RNA5SP164-201ENST00000516533 110 ntBASIC3.6□□□□□ -1.83
GPC1P35052 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.6□□□□□ -1.83
GPC1P35052 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC1P35052 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC1P35052 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
GPC1P35052 MIR5197-201ENST00000583721 112 ntBASIC3.6□□□□□ -1.83
GPC1P35052 SNORD115-40-201ENST00000606510 82 ntBASIC3.6□□□□□ -1.83
GPC1P35052 SCARNA17.4-201ENST00000614296 143 ntBASIC3.6□□□□□ -1.83
GPC1P35052 Y_RNA.818-201ENST00000618813 71 ntBASIC3.6□□□□□ -1.83
GPC1P35052 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GPC1P35052 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GPC1P35052 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC1P35052 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GPC1P35052 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC1P35052 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
GPC1P35052 MIR494-201ENST00000349529 81 ntBASIC3.59□□□□□ -1.83
GPC1P35052 RNU1-72P-201ENST00000362976 153 ntBASIC3.59□□□□□ -1.83
GPC1P35052 SNORA2.2-201ENST00000365473 135 ntBASIC3.59□□□□□ -1.83
GPC1P35052 RNU1-13P-201ENST00000384499 162 ntBASIC3.59□□□□□ -1.83
GPC1P35052 MIR518F-201ENST00000384973 87 ntBASIC3.59□□□□□ -1.83
GPC1P35052 RN7SKP156-201ENST00000410308 342 ntBASIC3.59□□□□□ -1.83
GPC1P35052 RNU6-592P-201ENST00000411333 103 ntBASIC3.59□□□□□ -1.83
GPC1P35052 AC009414.1-201ENST00000427200 443 ntBASIC3.59□□□□□ -1.83
GPC1P35052 MTATP8P2-201ENST00000435212 202 ntBASIC3.59□□□□□ -1.83
GPC1P35052 RPS26P48-201ENST00000491713 339 ntBASIC3.59□□□□□ -1.83
GPC1P35052 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.59□□□□□ -1.83
GPC1P35052 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
GPC1P35052 MIR4474-201ENST00000579189 78 ntBASIC3.59□□□□□ -1.83
GPC1P35052 AL137849.1-201ENST00000604767 169 ntBASIC3.59□□□□□ -1.83
GPC1P35052 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC1P35052 ZYXP1-201ENST00000617638 118 ntBASIC3.59□□□□□ -1.83
GPC1P35052 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
GPC1P35052 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC1P35052 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
GPC1P35052 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 MIR372-201ENST00000362225 67 ntBASIC3.58□□□□□ -1.84
GPC1P35052 MIR126-201ENST00000362291 85 ntBASIC3.58□□□□□ -1.84
GPC1P35052 SNORA63D-201ENST00000364359 132 ntBASIC3.58□□□□□ -1.84
GPC1P35052 RNU6-1134P-201ENST00000365156 101 ntBASIC3.58□□□□□ -1.84
GPC1P35052 MIR450A2-201ENST00000385022 100 ntBASIC3.58□□□□□ -1.84
GPC1P35052 U8.17-201ENST00000391292 132 ntBASIC3.58□□□□□ -1.84
GPC1P35052 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.58□□□□□ -1.84
GPC1P35052 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
GPC1P35052 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
GPC1P35052 RN7SKP209-201ENST00000516888 304 ntBASIC3.58□□□□□ -1.84
GPC1P35052 RNU7-70P-201ENST00000516941 66 ntBASIC3.58□□□□□ -1.84
GPC1P35052 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
GPC1P35052 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 AC021443.1-201ENST00000604478 211 ntBASIC3.58□□□□□ -1.84
GPC1P35052 U2.20-201ENST00000613956 192 ntBASIC3.58□□□□□ -1.84
GPC1P35052 MALAT1.1-201ENST00000618249 95 ntBASIC3.58□□□□□ -1.84
GPC1P35052 RNA5SP196-201ENST00000625967 102 ntBASIC3.58□□□□□ -1.84
GPC1P35052 MIR2052-201ENST00000636055 55 ntBASIC3.58□□□□□ -1.84
GPC1P35052 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GPC1P35052 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GPC1P35052 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GPC1P35052 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GPC1P35052 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
GPC1P35052 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.57□□□□□ -1.84
GPC1P35052 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GPC1P35052 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
GPC1P35052 MT-TI-201ENST00000387365 69 ntBASIC3.57□□□□□ -1.84
GPC1P35052 AL139247.1-201ENST00000422768 325 ntBASIC3.57□□□□□ -1.84
GPC1P35052 AP001486.1-201ENST00000463339 476 ntBASIC3.57□□□□□ -1.84
GPC1P35052 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.57□□□□□ -1.84
GPC1P35052 ICE2P2-201ENST00000483823 2787 ntBASIC3.57□□□□□ -1.84
GPC1P35052 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
GPC1P35052 RNA5SP208-201ENST00000516156 78 ntBASIC3.57□□□□□ -1.84
GPC1P35052 Y_RNA.714-201ENST00000517065 90 ntBASIC3.57□□□□□ -1.84
GPC1P35052 SUMO2P16-201ENST00000519475 264 ntBASIC3.57□□□□□ -1.84
GPC1P35052 AC084364.2-201ENST00000546924 395 ntBASIC3.57□□□□□ -1.84
GPC1P35052 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.57□□□□□ -1.84
GPC1P35052 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GPC1P35052 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GPC1P35052 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.56□□□□□ -1.84
GPC1P35052 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
GPC1P35052 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GPC1P35052 Y_RNA.265-201ENST00000364677 108 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RNA5SP283-201ENST00000365604 119 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RNU6-546P-201ENST00000383991 107 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RNU6-820P-201ENST00000384273 107 ntBASIC3.56□□□□□ -1.84
GPC1P35052 MIR218-1-201ENST00000384999 110 ntBASIC3.56□□□□□ -1.84
GPC1P35052 SNORA57.1-201ENST00000391227 145 ntBASIC3.56□□□□□ -1.84
GPC1P35052 AC060773.1-201ENST00000421698 310 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 292.6 ms