Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL117187.1-201ENST00000555482 181 ntBASIC2.04□□□□□ -2.08
HOXC8P31273 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXC8P31273 MIR4659A-201ENST00000580269 81 ntBASIC2.04□□□□□ -2.08
HOXC8P31273 MIR5006-201ENST00000583027 110 ntBASIC2.04□□□□□ -2.08
HOXC8P31273 AL355297.3-201ENST00000604082 446 ntBASIC2.04□□□□□ -2.08
HOXC8P31273 MZT1P2-201ENST00000604387 248 ntBASIC2.04□□□□□ -2.08
HOXC8P31273 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HOXC8P31273 RNU6-238P-201ENST00000363313 106 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 Y_RNA.133-201ENST00000363428 110 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNU6-1164P-201ENST00000364428 107 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNU6-245P-201ENST00000384020 107 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 Y_RNA.458-201ENST00000384240 102 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 MIR329-1-201ENST00000385028 80 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AL627390.1-201ENST00000396055 340 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 MIR320B2-201ENST00000408479 138 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNU6-130P-201ENST00000411112 103 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXC8P31273 SDAD1P3-201ENST00000427380 333 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC108667.1-201ENST00000428618 249 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RPL23AP3-201ENST00000453844 468 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC091179.3-201ENST00000474761 144 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNU6-1012P-201ENST00000516606 109 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RN7SKP49-201ENST00000516675 260 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 RNU2-44P-201ENST00000516795 194 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC026470.2-201ENST00000561492 181 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AL021879.1-201ENST00000611756 288 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC240442.1-201ENST00000616055 283 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
HOXC8P31273 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HOXC8P31273 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
HOXC8P31273 Y_RNA.179-201ENST00000363844 90 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 SNORA63.7-201ENST00000365579 123 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RNU6-793P-201ENST00000384233 104 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RNU6-1145P-201ENST00000384246 107 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 Y_RNA.512-201ENST00000384518 102 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HOXC8P31273 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HOXC8P31273 AL033519.2-201ENST00000403958 392 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RNU2-20P-201ENST00000410425 191 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC8P31273 RPS23P5-201ENST00000495419 428 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AC067942.3-201ENST00000512025 362 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 Y_RNA.683-201ENST00000516508 93 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 RRN3P3-201ENST00000549207 578 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.02□□□□□ -2.09
HOXC8P31273 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXC8P31273 AL121655.1-201ENST00000605811 308 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC8P31273 TCL6_2.1-201ENST00000615162 119 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 AC091932.3-201ENST00000624223 323 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC8P31273 MTND5P35-201ENST00000557537 1720 ntBASIC2.02□□□□□ -2.09
HOXC8P31273 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC8P31273 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC8P31273 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC8P31273 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC8P31273 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HOXC8P31273 Y_RNA.26-201ENST00000362539 101 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 Y_RNA.152-201ENST00000363578 100 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXC8P31273 MIR597-201ENST00000384968 97 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 Y_RNA.595-201ENST00000410403 105 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC8P31273 AC123900.1-201ENST00000420390 96 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC8P31273 ELOCP20-201ENST00000422460 345 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 FCF1P4-201ENST00000448326 183 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 RNU7-14P-201ENST00000459331 62 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 RNY3P15-201ENST00000516297 97 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 RNU6-1098P-201ENST00000516772 96 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 RNU1-117P-201ENST00000517041 158 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 RNU6-897P-201ENST00000517135 105 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC8P31273 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
HOXC8P31273 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC8P31273 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC8P31273 Y_RNA.47-201ENST00000362697 108 ntBASIC2□□□□□ -2.09
HOXC8P31273 RNU5F-3P-201ENST00000363767 117 ntBASIC2□□□□□ -2.09
HOXC8P31273 Y_RNA.214-201ENST00000364201 112 ntBASIC2□□□□□ -2.09
HOXC8P31273 RNU6-806P-201ENST00000365147 105 ntBASIC2□□□□□ -2.09
HOXC8P31273 Y_RNA.415-201ENST00000384012 112 ntBASIC2□□□□□ -2.09
HOXC8P31273 Y_RNA.439-201ENST00000384119 94 ntBASIC2□□□□□ -2.09
HOXC8P31273 MIR568-201ENST00000385036 95 ntBASIC2□□□□□ -2.09
HOXC8P31273 RPL21P1-201ENST00000399532 476 ntBASIC2□□□□□ -2.09
HOXC8P31273 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
HOXC8P31273 DYNLT3P2-201ENST00000442517 295 ntBASIC2□□□□□ -2.09
HOXC8P31273 AC073910.1-201ENST00000445047 438 ntBASIC2□□□□□ -2.09
HOXC8P31273 AC009237.7-201ENST00000447357 229 ntBASIC2□□□□□ -2.09
HOXC8P31273 UQCRBP2-201ENST00000447827 297 ntBASIC2□□□□□ -2.09
HOXC8P31273 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms