Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU4-10P-201ENST00000364383 140 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNU6-117P-201ENST00000365415 107 ntBASIC2.62□□□□□ -1.99
CD40P25942 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.62□□□□□ -1.99
CD40P25942 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
CD40P25942 SNORA40.19-201ENST00000390846 128 ntBASIC2.62□□□□□ -1.99
CD40P25942 AL355497.1-201ENST00000406262 551 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNA5SP511-201ENST00000410487 115 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNA5SP293-201ENST00000410527 113 ntBASIC2.62□□□□□ -1.99
CD40P25942 RN7SKP284-201ENST00000411002 343 ntBASIC2.62□□□□□ -1.99
CD40P25942 COTL1P1-201ENST00000422309 375 ntBASIC2.62□□□□□ -1.99
CD40P25942 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNU1-131P-201ENST00000458943 161 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNU7-120P-201ENST00000459334 63 ntBASIC2.62□□□□□ -1.99
CD40P25942 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.62□□□□□ -1.99
CD40P25942 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.62□□□□□ -1.99
CD40P25942 RNU6-1278P-201ENST00000516130 107 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNU1-143P-201ENST00000516296 146 ntBASIC2.62□□□□□ -1.99
CD40P25942 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.62□□□□□ -1.99
CD40P25942 SNORA64.4-201ENST00000516632 81 ntBASIC2.62□□□□□ -1.99
CD40P25942 AC100767.1-201ENST00000528178 123 ntBASIC2.62□□□□□ -1.99
CD40P25942 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
CD40P25942 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD40P25942 AC005972.2-201ENST00000604690 348 ntBASIC2.62□□□□□ -1.99
CD40P25942 U1.23-201ENST00000610293 146 ntBASIC2.62□□□□□ -1.99
CD40P25942 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
CD40P25942 RNU1-68P-201ENST00000615382 146 ntBASIC2.62□□□□□ -1.99
CD40P25942 MIR548AY-201ENST00000617669 107 ntBASIC2.62□□□□□ -1.99
CD40P25942 FTX_2.1-201ENST00000618816 94 ntBASIC2.62□□□□□ -1.99
CD40P25942 U6.73-201ENST00000619194 103 ntBASIC2.62□□□□□ -1.99
CD40P25942 U1.39-201ENST00000621562 146 ntBASIC2.62□□□□□ -1.99
CD40P25942 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.62□□□□□ -1.99
CD40P25942 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CD40P25942 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CD40P25942 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CD40P25942 RNA5SP383-201ENST00000362934 120 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU6-1205P-201ENST00000363625 106 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU4-13P-201ENST00000364019 141 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNA5SP493-201ENST00000364115 91 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
CD40P25942 Y_RNA.270-201ENST00000364693 104 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU6-918P-201ENST00000391219 106 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNU6-1186P-201ENST00000410429 97 ntBASIC2.61□□□□□ -1.99
CD40P25942 RNA5SP492-201ENST00000411330 114 ntBASIC2.61□□□□□ -1.99
CD40P25942 COX6CP10-201ENST00000416832 224 ntBASIC2.61□□□□□ -1.99
CD40P25942 ATP5J2P3-201ENST00000451550 258 ntBASIC2.61□□□□□ -1.99
CD40P25942 RPS27P29-201ENST00000463110 252 ntBASIC2.61□□□□□ -1.99
CD40P25942 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.61□□□□□ -1.99
CD40P25942 YWHAEP4-201ENST00000505390 198 ntBASIC2.61□□□□□ -1.99
CD40P25942 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.61□□□□□ -1.99
CD40P25942 RNU7-115P-201ENST00000516433 55 ntBASIC2.61□□□□□ -1.99
CD40P25942 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.61□□□□□ -1.99
CD40P25942 EIF4BP1-201ENST00000554881 351 ntBASIC2.61□□□□□ -1.99
CD40P25942 AL031274.2-201ENST00000599419 203 ntBASIC2.61□□□□□ -1.99
CD40P25942 AC006386.2-201ENST00000624491 75 ntBASIC2.61□□□□□ -1.99
CD40P25942 AC012005.1-201ENST00000624575 75 ntBASIC2.61□□□□□ -1.99
CD40P25942 MIR338-201ENST00000636369 67 ntBASIC2.61□□□□□ -1.99
CD40P25942 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
CD40P25942 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CD40P25942 AL365361.1-201ENST00000566942 3481 ntBASIC2.61□□□□□ -1.99
CD40P25942 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CD40P25942 RNU6-23P-201ENST00000363283 107 ntBASIC2.6□□□□□ -1.99
CD40P25942 RNU4-17P-201ENST00000365598 141 ntBASIC2.6□□□□□ -1.99
CD40P25942 RNU6-376P-201ENST00000384731 106 ntBASIC2.6□□□□□ -1.99
CD40P25942 AL135786.1-201ENST00000415892 214 ntBASIC2.6□□□□□ -1.99
CD40P25942 RPL36AP21-201ENST00000490372 323 ntBASIC2.6□□□□□ -1.99
CD40P25942 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
CD40P25942 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
CD40P25942 AC015720.1-201ENST00000565251 277 ntBASIC2.6□□□□□ -1.99
CD40P25942 POLR3GP1-201ENST00000594073 261 ntBASIC2.6□□□□□ -1.99
CD40P25942 AL137790.1-201ENST00000634283 177 ntBASIC2.6□□□□□ -1.99
CD40P25942 AC009487.2-201ENST00000420969 6821 ntBASIC2.6□□□□□ -1.99
CD40P25942 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD40P25942 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD40P25942 AC073325.2-201ENST00000339545 159 ntBASIC2.59□□□□□ -1.99
CD40P25942 SNORD56.3-201ENST00000363507 71 ntBASIC2.59□□□□□ -1.99
CD40P25942 RNU6-1323P-201ENST00000384025 107 ntBASIC2.59□□□□□ -1.99
CD40P25942 Y_RNA.555-201ENST00000384673 110 ntBASIC2.59□□□□□ -1.99
CD40P25942 RNA5SP467-201ENST00000391274 118 ntBASIC2.59□□□□□ -1.99
CD40P25942 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
CD40P25942 EBAG9P1-201ENST00000418955 543 ntBASIC2.59□□□□□ -1.99
CD40P25942 AL162725.1-201ENST00000435405 301 ntBASIC2.59□□□□□ -1.99
CD40P25942 AL109933.2-201ENST00000452651 260 ntBASIC2.59□□□□□ -1.99
CD40P25942 RPS29P21-201ENST00000496272 170 ntBASIC2.59□□□□□ -1.99
CD40P25942 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
CD40P25942 SCARNA13-201ENST00000516672 275 ntBASIC2.59□□□□□ -1.99
CD40P25942 RNU6-861P-201ENST00000516745 106 ntBASIC2.59□□□□□ -1.99
CD40P25942 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
CD40P25942 MIR3169-201ENST00000578032 83 ntBASIC2.59□□□□□ -1.99
CD40P25942 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.59□□□□□ -1.99
CD40P25942 AP003357.1-201ENST00000604497 148 ntBASIC2.59□□□□□ -1.99
CD40P25942 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.59□□□□□ -2
CD40P25942 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CD40P25942 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CD40P25942 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.58□□□□□ -2
CD40P25942 Y_RNA.233-201ENST00000364407 101 ntBASIC2.58□□□□□ -2
CD40P25942 SNORA8.3-201ENST00000384679 139 ntBASIC2.58□□□□□ -2
CD40P25942 SNORA36B-201ENST00000410438 131 ntBASIC2.58□□□□□ -2
CD40P25942 RNA5SP274-201ENST00000410484 108 ntBASIC2.58□□□□□ -2
CD40P25942 AC107083.1-201ENST00000439643 279 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms