Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VAMP1P23763 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
VAMP1P23763 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAMP1P23763 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
VAMP1P23763 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAMP1P23763 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.88□□□□□ -1.95
VAMP1P23763 Y_RNA.7-201ENST00000362352 102 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 RNU6-653P-201ENST00000363074 106 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 SNORA62-201ENST00000365493 153 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 MIR626-201ENST00000385032 94 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.88□□□□□ -1.95
VAMP1P23763 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.88□□□□□ -1.95
VAMP1P23763 AL358944.1-201ENST00000528537 144 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.88□□□□□ -1.95
VAMP1P23763 MIR4287-201ENST00000579398 78 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 MIR6867-201ENST00000610636 67 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.88□□□□□ -1.95
VAMP1P23763 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.88□□□□□ -1.95
VAMP1P23763 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAMP1P23763 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
VAMP1P23763 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VAMP1P23763 MFSD8-233ENST00000641482 4860 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.87□□□□□ -1.95
VAMP1P23763 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.87□□□□□ -1.95
VAMP1P23763 RNU1-70P-201ENST00000362618 164 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 Y_RNA.270-201ENST00000364693 104 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 MIR802-201ENST00000390235 94 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VAMP1P23763 RNU6-907P-201ENST00000390924 102 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 Y_RNA.625-201ENST00000411256 107 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 AL356095.1-201ENST00000417217 199 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 AC105272.1-201ENST00000438604 198 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.87□□□□□ -1.95
VAMP1P23763 Y_RNA.797-201ENST00000515977 94 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAMP1P23763 RPL23AP91-201ENST00000569211 455 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 SNORA28-201ENST00000606769 126 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 CTSLP2-204ENST00000629029 392 ntBASIC2.87□□□□□ -1.95
VAMP1P23763 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VAMP1P23763 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAMP1P23763 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAMP1P23763 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAMP1P23763 SNORA1B-201ENST00000362535 133 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RNA5SP276-201ENST00000362580 94 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RNU6-674P-201ENST00000363831 107 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RNU2-2P-201ENST00000410396 191 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RN7SKP200-201ENST00000410564 320 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 AC063976.3-201ENST00000426849 329 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RPL39P40-201ENST00000445481 146 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 AC055731.1-201ENST00000474387 401 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 AC245166.1-201ENST00000521012 253 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 CYCSP30-201ENST00000546447 172 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 AC072026.1-201ENST00000605023 201 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 RNU2-4P-201ENST00000606190 192 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 AC004792.1-201ENST00000614523 137 ntBASIC2.86□□□□□ -1.95
VAMP1P23763 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAMP1P23763 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAMP1P23763 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.85□□□□□ -1.95
VAMP1P23763 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VAMP1P23763 SNORD68-201ENST00000363214 84 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 RNU6-103P-201ENST00000363686 107 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 RNA5SP496-201ENST00000391240 109 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VAMP1P23763 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
VAMP1P23763 AC245047.8-201ENST00000456455 284 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 RNU7-34P-201ENST00000459394 64 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 HMGN1P7-201ENST00000491722 313 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 RNA5SP217-201ENST00000515959 91 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 RNA5SP481-201ENST00000516814 122 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 AC022080.3-201ENST00000544433 482 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 AC091544.4-201ENST00000555268 342 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 AP000346.3-201ENST00000622821 210 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 AC073476.4-201ENST00000628409 72 ntBASIC2.85□□□□□ -1.95
VAMP1P23763 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
VAMP1P23763 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
VAMP1P23763 ZNF702P-202ENST00000434269 1966 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 MIR126-201ENST00000362291 85 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 Y_RNA.182-201ENST00000363880 111 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 RNU1-33P-201ENST00000364249 162 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 RNU6-440P-201ENST00000390882 105 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 AC245047.4-201ENST00000433189 144 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 CST9LP2-201ENST00000437612 320 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 STAG3L5P-204ENST00000443759 179 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 RN7SL385P-201ENST00000468873 276 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 RNU7-28P-201ENST00000516759 62 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 CBX3P4-201ENST00000538909 354 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.84□□□□□ -1.95
VAMP1P23763 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 AC022217.4-201ENST00000604389 163 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VAMP1P23763 U4.6-201ENST00000621618 127 ntBASIC2.84□□□□□ -1.95
VAMP1P23763 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.84□□□□□ -1.95
VAMP1P23763 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.84□□□□□ -1.95
VAMP1P23763 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAMP1P23763 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VAMP1P23763 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
VAMP1P23763 Y_RNA.238-201ENST00000364441 102 ntBASIC2.83□□□□□ -1.96
VAMP1P23763 Y_RNA.571-201ENST00000384753 98 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms