Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CDH3P22223 Y_RNA.80-201ENST00000362996 102 ntBASIC1.76□□□□□ -2.13
CDH3P22223 RNU6-1264P-201ENST00000383891 107 ntBASIC1.76□□□□□ -2.13
CDH3P22223 Y_RNA.445-201ENST00000384168 102 ntBASIC1.76□□□□□ -2.13
CDH3P22223 Y_RNA.485-201ENST00000384395 102 ntBASIC1.76□□□□□ -2.13
CDH3P22223 MCFD2P1-201ENST00000417812 300 ntBASIC1.76□□□□□ -2.13
CDH3P22223 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH3P22223 RPL26P26-201ENST00000480251 434 ntBASIC1.76□□□□□ -2.13
CDH3P22223 AC010469.2-201ENST00000496412 480 ntBASIC1.76□□□□□ -2.13
CDH3P22223 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.76□□□□□ -2.13
CDH3P22223 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
CDH3P22223 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.76□□□□□ -2.13
CDH3P22223 RNU6-1012P-201ENST00000516606 109 ntBASIC1.76□□□□□ -2.13
CDH3P22223 RNU6-107P-201ENST00000516643 102 ntBASIC1.76□□□□□ -2.13
CDH3P22223 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
CDH3P22223 SUMO2P18-201ENST00000518873 252 ntBASIC1.76□□□□□ -2.13
CDH3P22223 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH3P22223 MIR5188-201ENST00000583467 113 ntBASIC1.76□□□□□ -2.13
CDH3P22223 AL353149.1-201ENST00000610667 244 ntBASIC1.76□□□□□ -2.13
CDH3P22223 AC006157.1-201ENST00000611750 366 ntBASIC1.76□□□□□ -2.13
CDH3P22223 U1.36-201ENST00000620684 176 ntBASIC1.76□□□□□ -2.13
CDH3P22223 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.76□□□□□ -2.13
CDH3P22223 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
CDH3P22223 Y_RNA.27-201ENST00000362540 103 ntBASIC1.75□□□□□ -2.13
CDH3P22223 Y_RNA.39-201ENST00000362620 98 ntBASIC1.75□□□□□ -2.13
CDH3P22223 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
CDH3P22223 RNU6-926P-201ENST00000384075 107 ntBASIC1.75□□□□□ -2.13
CDH3P22223 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
CDH3P22223 TOMM22P2-201ENST00000430735 237 ntBASIC1.75□□□□□ -2.13
CDH3P22223 HMGN2P34-201ENST00000437647 269 ntBASIC1.75□□□□□ -2.13
CDH3P22223 MTND4P19-201ENST00000446659 478 ntBASIC1.75□□□□□ -2.13
CDH3P22223 RNU6-625P-201ENST00000459412 107 ntBASIC1.75□□□□□ -2.13
CDH3P22223 RN7SKP295-201ENST00000517264 153 ntBASIC1.75□□□□□ -2.13
CDH3P22223 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH3P22223 MIR4285-201ENST00000581001 85 ntBASIC1.75□□□□□ -2.13
CDH3P22223 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
CDH3P22223 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
CDH3P22223 MIR338-201ENST00000636369 67 ntBASIC1.75□□□□□ -2.13
CDH3P22223 U6.92-201ENST00000636464 89 ntBASIC1.75□□□□□ -2.13
CDH3P22223 MIR410-201ENST00000362222 80 ntBASIC1.74□□□□□ -2.13
CDH3P22223 RNU6-862P-201ENST00000362804 105 ntBASIC1.74□□□□□ -2.13
CDH3P22223 snoU2-30.2-201ENST00000362805 70 ntBASIC1.74□□□□□ -2.13
CDH3P22223 RNU6-961P-201ENST00000363893 105 ntBASIC1.74□□□□□ -2.13
CDH3P22223 SNORD78.2-201ENST00000391076 69 ntBASIC1.74□□□□□ -2.13
CDH3P22223 AL354751.2-201ENST00000415471 210 ntBASIC1.74□□□□□ -2.13
CDH3P22223 RAB28P5-201ENST00000427490 651 ntBASIC1.74□□□□□ -2.13
CDH3P22223 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH3P22223 Y_RNA.631-201ENST00000459607 101 ntBASIC1.74□□□□□ -2.13
CDH3P22223 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH3P22223 SNORA40.14-201ENST00000516543 86 ntBASIC1.74□□□□□ -2.13
CDH3P22223 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDH3P22223 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.74□□□□□ -2.13
CDH3P22223 MIR4769-201ENST00000584126 77 ntBASIC1.74□□□□□ -2.13
CDH3P22223 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
CDH3P22223 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDH3P22223 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDH3P22223 Y_RNA.148-201ENST00000363557 117 ntBASIC1.73□□□□□ -2.13
CDH3P22223 SNORA33-201ENST00000363664 130 ntBASIC1.73□□□□□ -2.13
CDH3P22223 RNU6-454P-201ENST00000364292 107 ntBASIC1.73□□□□□ -2.13
CDH3P22223 Y_RNA.287-201ENST00000364853 94 ntBASIC1.73□□□□□ -2.13
CDH3P22223 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.73□□□□□ -2.13
CDH3P22223 Y_RNA.498-201ENST00000384460 102 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC009310.1-201ENST00000414414 451 ntBASIC1.73□□□□□ -2.13
CDH3P22223 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.73□□□□□ -2.13
CDH3P22223 CYCSP49-201ENST00000420810 319 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC008134.1-201ENST00000420943 193 ntBASIC1.73□□□□□ -2.13
CDH3P22223 MTCO2P12-201ENST00000427426 682 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AL160004.2-201ENST00000432935 350 ntBASIC1.73□□□□□ -2.13
CDH3P22223 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.73□□□□□ -2.13
CDH3P22223 FCF1P4-201ENST00000448326 183 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC112492.4-201ENST00000456549 352 ntBASIC1.73□□□□□ -2.13
CDH3P22223 HMGN2P23-201ENST00000456759 269 ntBASIC1.73□□□□□ -2.13
CDH3P22223 RNU6-408P-201ENST00000515910 100 ntBASIC1.73□□□□□ -2.13
CDH3P22223 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
CDH3P22223 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC055872.1-201ENST00000570978 278 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC011476.5-201ENST00000615594 130 ntBASIC1.73□□□□□ -2.13
CDH3P22223 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
CDH3P22223 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH3P22223 AC134503.1-201ENST00000633048 54 ntBASIC1.73□□□□□ -2.13
CDH3P22223 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CDH3P22223 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH3P22223 Y_RNA.128-201ENST00000363391 112 ntBASIC1.72□□□□□ -2.13
CDH3P22223 RNU6-1240P-201ENST00000365155 104 ntBASIC1.72□□□□□ -2.13
CDH3P22223 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
CDH3P22223 MIR548P-201ENST00000408336 84 ntBASIC1.72□□□□□ -2.13
CDH3P22223 MTCO3P19-201ENST00000415864 321 ntBASIC1.72□□□□□ -2.13
CDH3P22223 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH3P22223 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH3P22223 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
CDH3P22223 RNU6-475P-201ENST00000516073 104 ntBASIC1.72□□□□□ -2.13
CDH3P22223 Y_RNA.701-201ENST00000516812 110 ntBASIC1.72□□□□□ -2.13
CDH3P22223 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH3P22223 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH3P22223 AC020661.2-201ENST00000560114 134 ntBASIC1.72□□□□□ -2.13
CDH3P22223 MIR5094-201ENST00000578766 85 ntBASIC1.72□□□□□ -2.13
CDH3P22223 MIR4659A-201ENST00000580269 81 ntBASIC1.72□□□□□ -2.13
CDH3P22223 AL138825.1-201ENST00000618587 192 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms