Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU4-62P-201ENST00000410125 130 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNA5SP475-201ENST00000410568 110 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU2-32P-201ENST00000411193 191 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 AP1B1P2-201ENST00000416196 106 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 TOMM22P2-201ENST00000430735 237 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU6-1132P-201ENST00000459214 107 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU7-110P-201ENST00000516891 62 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU1-117P-201ENST00000517041 158 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF3O95398 AL355297.2-201ENST00000604792 129 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 AC022441.3-201ENST00000605737 136 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 AC010615.1-201ENST00000594254 1764 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAPGEF3O95398 SNORD31B-201ENST00000364977 69 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 RNA5SP190-201ENST00000365222 118 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 RNU6-1026P-201ENST00000384465 108 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 MIR215-201ENST00000384858 110 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 AC019129.1-201ENST00000403786 261 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 MIR1283-1-201ENST00000408494 87 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 Y_RNA.602-201ENST00000410535 92 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 AC074290.1-201ENST00000448883 135 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 snoU13.18-201ENST00000459483 104 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 MIR449C-201ENST00000516047 92 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 AC023157.2-201ENST00000540596 141 ntBASIC3.12□□□□□ -1.91
RAPGEF3O95398 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.12□□□□□ -1.91
RAPGEF3O95398 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAPGEF3O95398 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAPGEF3O95398 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 RNU6-1305P-201ENST00000364353 104 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 SNORD87-201ENST00000364849 89 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 RNU6-290P-201ENST00000365212 101 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC139712.2-201ENST00000424302 339 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC114982.1-201ENST00000469402 321 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 RNU6-107P-201ENST00000516643 102 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC090616.3-201ENST00000582184 217 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC004467.1-201ENST00000615678 330 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AP001282.2-201ENST00000616149 309 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC127459.3-201ENST00000624328 466 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
RAPGEF3O95398 AC009487.4-201ENST00000624969 3585 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 Y_RNA.562-201ENST00000384695 113 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 AL357139.1-201ENST00000407792 426 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 AC005042.3-201ENST00000453230 174 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 MIR4753-201ENST00000585119 83 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 AL590240.4-201ENST00000616908 390 ntBASIC3.1□□□□□ -1.91
RAPGEF3O95398 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
RAPGEF3O95398 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.1□□□□□ -1.91
RAPGEF3O95398 AL391987.6-201ENST00000305671 199 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 Y_RNA.14-201ENST00000362415 103 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 RNU1-23P-201ENST00000363361 144 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 Y_RNA.350-201ENST00000365409 98 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 Y_RNA.541-201ENST00000384640 113 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 MIR7-2-201ENST00000384970 110 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 RNU2-54P-201ENST00000410299 190 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 AC003989.2-201ENST00000440224 169 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 MTND4LP30-201ENST00000454092 297 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 HSPE1P25-201ENST00000455484 251 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 RPL39P38-201ENST00000467018 153 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 HMGN2P9-201ENST00000476875 229 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 RNU6-1271P-201ENST00000517049 105 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 AL109918.3-201ENST00000603072 338 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 U4atac.1-201ENST00000618345 95 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 AC006001.4-201ENST00000622243 395 ntBASIC3.09□□□□□ -1.91
RAPGEF3O95398 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAPGEF3O95398 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAPGEF3O95398 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RAPGEF3O95398 RNU6-545P-201ENST00000362681 104 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 Y_RNA.331-201ENST00000365267 102 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 Y_RNA.476-201ENST00000384347 108 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 Y_RNA.489-201ENST00000384410 101 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 SNORA48.3-201ENST00000391081 134 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 SNORA53-201ENST00000391141 249 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAPGEF3O95398 RNU4-30P-201ENST00000410245 143 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF3O95398 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.08□□□□□ -1.92
RAPGEF3O95398 AC016925.1-201ENST00000458303 298 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 ATP5EP1-201ENST00000510257 156 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 RNA5SP76-201ENST00000516277 87 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 RNU6-1338P-201ENST00000516328 91 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 AC055872.1-201ENST00000570978 278 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 MIR3684-201ENST00000579779 74 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 AC006380.1-201ENST00000603598 186 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 AC091932.3-201ENST00000624223 323 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 MIR1248-201ENST00000629190 106 ntBASIC3.08□□□□□ -1.92
RAPGEF3O95398 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF3O95398 RNA5SP125-201ENST00000364843 120 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 Y_RNA.307-201ENST00000365022 117 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 RNU6-326P-201ENST00000365480 107 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 Y_RNA.478-201ENST00000384358 107 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 RNU6-102P-201ENST00000384485 104 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 MIR548H3-201ENST00000408771 118 ntBASIC3.07□□□□□ -1.92
RAPGEF3O95398 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms