Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CR383656.4-201ENST00000546909 122 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL442163.3-201ENST00000554110 156 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC080078.2-201ENST00000603766 501 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL354950.2-201ENST00000617939 290 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.53□□□□□ -2.49
USH2AO75445 RNU6-862P-201ENST00000362804 105 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 SNORD114-6-201ENST00000364393 72 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL590383.1-201ENST00000428602 75 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 POLR2KP2-201ENST00000438155 177 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RPL26P6-201ENST00000440913 438 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 BTBD7P2-201ENST00000441962 620 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RPS29P24-201ENST00000486345 171 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC079395.1-201ENST00000510981 262 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC020661.2-201ENST00000560114 134 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC133485.4-201ENST00000561835 220 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU4-24P-201ENST00000364565 139 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 SNORD111-201ENST00000408139 94 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.53□□□□□ -2.49
USH2AO75445 AC024995.1-201ENST00000523014 93 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC018448.1-201ENST00000552843 316 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC138749.4-201ENST00000563970 127 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC023827.1-201ENST00000569247 97 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC010525.2-201ENST00000590920 195 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RN7SKP299-201ENST00000606679 301 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL354696.1-201ENST00000614652 497 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC133104.2-201ENST00000615272 193 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU6-490P-201ENST00000362985 107 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU6-934P-201ENST00000365154 107 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 SNORA2.2-201ENST00000365473 135 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU6-31P-201ENST00000384388 108 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
USH2AO75445 BX276092.1-201ENST00000427368 251 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 HMGN2P32-201ENST00000444648 269 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL929288.2-201ENST00000446368 407 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.53□□□□□ -2.49
USH2AO75445 SUMO2P18-201ENST00000518873 252 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.53□□□□□ -2.49
USH2AO75445 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 SNORD115-10-201ENST00000365073 81 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RPL31P54-201ENST00000429803 370 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC073910.1-201ENST00000445047 438 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MTCO2P7-201ENST00000446518 666 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-323P-201ENST00000521915 107 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC137800.2-201ENST00000574375 120 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MIRLET7B-201ENST00000385140 83 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL592447.1-201ENST00000447592 540 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL139824.2-201ENST00000458731 1095 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC005332.6-201ENST00000613178 446 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC008250.2-201ENST00000615261 205 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL513423.1-201ENST00000621695 132 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 SNORA27.3-201ENST00000364937 134 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-317P-201ENST00000384031 107 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MIR802-201ENST00000390235 94 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-258P-201ENST00000390884 101 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MTATP6P26-201ENST00000445926 662 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.54□□□□□ -2.5
USH2AO75445 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.54□□□□□ -2.5
USH2AO75445 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.54□□□□□ -2.5
USH2AO75445 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.54□□□□□ -2.5
USH2AO75445 AC079598.5-201ENST00000547460 117 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MIR518F-201ENST00000384973 87 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-519P-201ENST00000410590 108 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 DPRXP1-201ENST00000426312 460 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL353997.1-201ENST00000432936 108 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.54□□□□□ -2.5
USH2AO75445 AC116655.1-201ENST00000508324 901 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC011352.1-201ENST00000512300 793 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MIR2115-201ENST00000516657 100 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.54□□□□□ -2.5
USH2AO75445 AC090617.3-201ENST00000573670 475 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 MIR6507-201ENST00000613630 70 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 AC010205.1-201ENST00000616668 449 ntBASIC-0.54□□□□□ -2.5
USH2AO75445 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.55□□□□□ -2.5
USH2AO75445 AP000533.3-201ENST00000447704 118 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.55□□□□□ -2.5
USH2AO75445 PRDX4P1-201ENST00000507189 574 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
USH2AO75445 MRPS36P5-201ENST00000551909 298 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AC016542.1-201ENST00000608259 493 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AL078595.1-201ENST00000404458 226 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 SERF1AP1-201ENST00000514575 187 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU6-311P-201ENST00000516224 102 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.55□□□□□ -2.5
USH2AO75445 AC006600.1-201ENST00000572529 153 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.55□□□□□ -2.5
USH2AO75445 MIR1248-201ENST00000629190 106 ntBASIC-0.55□□□□□ -2.5
USH2AO75445 RNU1-141P-201ENST00000364623 158 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms