Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
TRIM13O60858 MTND5P18-201ENST00000445624 1801 ntBASIC3.03□□□□□ -1.93
TRIM13O60858 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM13O60858 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM13O60858 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM13O60858 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM13O60858 RNU6-766P-201ENST00000362478 107 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 RNU6-1010P-201ENST00000362757 107 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 RNU6-674P-201ENST00000363831 107 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 Y_RNA.558-201ENST00000384685 113 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 MIR873-201ENST00000401120 77 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 AL358232.1-201ENST00000448030 501 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 snoU13.14-201ENST00000459372 104 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 RNU6-437P-201ENST00000459408 95 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 RPL21P10-201ENST00000463521 490 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM13O60858 RNU6-1337P-201ENST00000516525 95 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM13O60858 POLR3GP1-201ENST00000594073 261 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 AC012493.2-201ENST00000595083 291 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 AC012442.3-202ENST00000636742 206 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 FAM35CP-201ENST00000554755 2470 ntBASIC3.02□□□□□ -1.93
TRIM13O60858 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM13O60858 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM13O60858 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM13O60858 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 RNU6-529P-201ENST00000363383 104 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 RNU6-1107P-201ENST00000364817 104 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 RNU6-1080P-201ENST00000383982 107 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 MIR490-201ENST00000384865 128 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM13O60858 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM13O60858 RPL36AP21-201ENST00000490372 323 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 RNU6-1299P-201ENST00000516316 100 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 SNORD59.2-201ENST00000516873 68 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 RNU7-116P-201ENST00000516940 62 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 AP003327.1-201ENST00000529684 127 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 AC097639.2-201ENST00000603159 172 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 AC093732.2-201ENST00000607950 274 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 AP001318.4-201ENST00000616637 121 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM13O60858 AL049781.1-201ENST00000623195 3585 ntBASIC3.01□□□□□ -1.93
TRIM13O60858 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
TRIM13O60858 GABRG2-229ENST00000641017 3628 ntBASIC3□□□□□ -1.93
TRIM13O60858 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM13O60858 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM13O60858 RNU1-33P-201ENST00000364249 162 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU6-1131P-201ENST00000364955 107 ntBASIC3□□□□□ -1.93
TRIM13O60858 Y_RNA.328-201ENST00000365208 113 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU6-49P-201ENST00000384256 107 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU6-1275P-201ENST00000391087 107 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNA5SP354-201ENST00000391247 136 ntBASIC3□□□□□ -1.93
TRIM13O60858 AL133475.1-201ENST00000404414 305 ntBASIC3□□□□□ -1.93
TRIM13O60858 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3□□□□□ -1.93
TRIM13O60858 HMGN2P31-201ENST00000432430 273 ntBASIC3□□□□□ -1.93
TRIM13O60858 RPL23AP54-201ENST00000495129 419 ntBASIC3□□□□□ -1.93
TRIM13O60858 AC145146.1-201ENST00000496370 254 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU6-638P-201ENST00000516582 104 ntBASIC3□□□□□ -1.93
TRIM13O60858 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
TRIM13O60858 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3□□□□□ -1.93
TRIM13O60858 uc_338.14-201ENST00000613162 166 ntBASIC3□□□□□ -1.93
TRIM13O60858 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRIM13O60858 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM13O60858 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM13O60858 AC000403.1-201ENST00000613696 3585 ntBASIC3□□□□□ -1.93
TRIM13O60858 RNU4-41P-201ENST00000364426 143 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 AL355796.1-201ENST00000406706 323 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 MIR1193-201ENST00000408109 78 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 MIR1185-2-201ENST00000408687 86 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM13O60858 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM13O60858 RNA5SP153-201ENST00000516498 76 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 AC106785.1-201ENST00000565935 262 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
TRIM13O60858 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM13O60858 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM13O60858 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM13O60858 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM13O60858 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM13O60858 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM13O60858 RNU6-756P-201ENST00000383997 107 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 MIR586-201ENST00000385035 97 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AL135786.1-201ENST00000415892 214 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM13O60858 AL121890.1-201ENST00000435457 205 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 HMGN2P32-201ENST00000444648 269 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 RNU1-45P-201ENST00000517191 141 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 IGKV1-22-201ENST00000524313 326 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM13O60858 PRELID2P1-201ENST00000552837 301 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AL049861.1-201ENST00000603130 150 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AC005972.2-201ENST00000604690 348 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms