Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 Y_RNA.637-201ENST00000459424 114 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.48□□□□□ -1.85
GRIN3BO60391 CYCTP-201ENST00000504253 315 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 SCARNA17.1-201ENST00000516211 143 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 SCARNA17.2-201ENST00000516334 143 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 Y_RNA.686-201ENST00000516548 134 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 AC136628.3-201ENST00000521868 290 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.48□□□□□ -1.85
GRIN3BO60391 MIR3613-201ENST00000579844 87 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.48□□□□□ -1.85
GRIN3BO60391 SCARNA17.4-201ENST00000614296 143 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 Y_RNA.778-201ENST00000620203 90 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.48□□□□□ -1.85
GRIN3BO60391 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
GRIN3BO60391 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GRIN3BO60391 Y_RNA.412-201ENST00000384001 104 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 MIR548B-201ENST00000385247 97 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 AL357139.1-201ENST00000407792 426 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.47□□□□□ -1.85
GRIN3BO60391 HMGN2P3-201ENST00000433603 273 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 HMGN2P5-201ENST00000436882 273 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 SUMO2P18-201ENST00000518873 252 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.47□□□□□ -1.85
GRIN3BO60391 AL133393.1-201ENST00000603277 287 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 UCA1.1-201ENST00000620952 75 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 AC007318.2-201ENST00000620999 243 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
GRIN3BO60391 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
GRIN3BO60391 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
GRIN3BO60391 Y_RNA.571-201ENST00000384753 98 ntBASIC3.46□□□□□ -1.86
GRIN3BO60391 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.46□□□□□ -1.86
GRIN3BO60391 SEPT7P4-201ENST00000437076 306 ntBASIC3.46□□□□□ -1.86
GRIN3BO60391 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.46□□□□□ -1.86
GRIN3BO60391 MRPS36P2-201ENST00000512569 299 ntBASIC3.46□□□□□ -1.86
GRIN3BO60391 AC107294.3-201ENST00000609211 526 ntBASIC3.46□□□□□ -1.86
GRIN3BO60391 U6.115-201ENST00000636045 103 ntBASIC3.46□□□□□ -1.86
GRIN3BO60391 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
GRIN3BO60391 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GRIN3BO60391 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.45□□□□□ -1.86
GRIN3BO60391 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GRIN3BO60391 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
GRIN3BO60391 PWAR6-201ENST00000552334 4618 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GRIN3BO60391 RNU6-801P-201ENST00000364087 105 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
GRIN3BO60391 RNU6-763P-201ENST00000390865 106 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 HMGN2P9-201ENST00000476875 229 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.45□□□□□ -1.86
GRIN3BO60391 HMGB3P3-201ENST00000510526 400 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
GRIN3BO60391 RNU5F-4P-201ENST00000516581 114 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 RNU6-1098P-201ENST00000516772 96 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 AC109329.2-201ENST00000519658 482 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.45□□□□□ -1.86
GRIN3BO60391 CYCSP26-201ENST00000534107 320 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.45□□□□□ -1.86
GRIN3BO60391 Y_RNA.802-201ENST00000614892 130 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 AC002064.3-201ENST00000623448 346 ntBASIC3.45□□□□□ -1.86
GRIN3BO60391 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
GRIN3BO60391 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
GRIN3BO60391 AC010329.5-201ENST00000623497 2174 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORD114-7-201ENST00000362520 77 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORA51.4-201ENST00000364993 124 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORA20-201ENST00000384662 132 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 MIR512-1-201ENST00000384913 84 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORA40-201ENST00000388090 126 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 MIR300-201ENST00000401138 83 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 MIR1287-201ENST00000408492 90 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 MIR1185-2-201ENST00000408687 86 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 RN7SKP223-201ENST00000410582 62 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 AL135790.2-201ENST00000437701 267 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 AC090517.3-201ENST00000625170 141 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.44□□□□□ -1.86
GRIN3BO60391 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
GRIN3BO60391 AC108206.1-201ENST00000570186 4159 ntBASIC3.44□□□□□ -1.86
GRIN3BO60391 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 Y_RNA.7-201ENST00000362352 102 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 RNU1-72P-201ENST00000362976 153 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 Y_RNA.121-201ENST00000363309 113 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 RNU6-1305P-201ENST00000364353 104 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 Y_RNA.368-201ENST00000365547 113 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 RNU4-17P-201ENST00000365598 141 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 MIR1294-201ENST00000408503 142 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.43□□□□□ -1.86
GRIN3BO60391 SNORA70.12-201ENST00000516084 153 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 AC100767.1-201ENST00000528178 123 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 AC018630.3-201ENST00000542637 96 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
GRIN3BO60391 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
GRIN3BO60391 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
GRIN3BO60391 Z82209.1-201ENST00000422141 2135 ntBASIC3.43□□□□□ -1.86
GRIN3BO60391 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GRIN3BO60391 AL159152.1-201ENST00000635019 2587 ntBASIC3.42□□□□□ -1.86
GRIN3BO60391 Y_RNA.23-201ENST00000362496 106 ntBASIC3.42□□□□□ -1.86
GRIN3BO60391 Y_RNA.456-201ENST00000384232 111 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms