Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -2
PROM1O43490 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PROM1O43490 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PROM1O43490 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
PROM1O43490 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PROM1O43490 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
PROM1O43490 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PROM1O43490 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PROM1O43490 RNU6-1272P-201ENST00000362776 107 ntBASIC2.58□□□□□ -2
PROM1O43490 SNORD115-30-201ENST00000364117 82 ntBASIC2.58□□□□□ -2
PROM1O43490 MIR586-201ENST00000385035 97 ntBASIC2.58□□□□□ -2
PROM1O43490 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
PROM1O43490 RNU6-493P-201ENST00000391321 108 ntBASIC2.58□□□□□ -2
PROM1O43490 MIR548M-201ENST00000408260 86 ntBASIC2.58□□□□□ -2
PROM1O43490 AC090515.1-201ENST00000465295 476 ntBASIC2.58□□□□□ -2
PROM1O43490 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
PROM1O43490 RNU6-861P-201ENST00000516745 106 ntBASIC2.58□□□□□ -2
PROM1O43490 AP005660.1-201ENST00000522972 293 ntBASIC2.58□□□□□ -2
PROM1O43490 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
PROM1O43490 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
PROM1O43490 AC011921.3-201ENST00000605540 361 ntBASIC2.58□□□□□ -2
PROM1O43490 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.58□□□□□ -2
PROM1O43490 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.58□□□□□ -2
PROM1O43490 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PROM1O43490 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
PROM1O43490 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
PROM1O43490 Y_RNA.262-201ENST00000364641 102 ntBASIC2.57□□□□□ -2
PROM1O43490 RNU6-234P-201ENST00000365229 104 ntBASIC2.57□□□□□ -2
PROM1O43490 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
PROM1O43490 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
PROM1O43490 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
PROM1O43490 AL121890.1-201ENST00000435457 205 ntBASIC2.57□□□□□ -2
PROM1O43490 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
PROM1O43490 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
PROM1O43490 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.57□□□□□ -2
PROM1O43490 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
PROM1O43490 RNU6-965P-201ENST00000516721 96 ntBASIC2.57□□□□□ -2
PROM1O43490 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
PROM1O43490 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
PROM1O43490 AL365265.1-201ENST00000621045 234 ntBASIC2.57□□□□□ -2
PROM1O43490 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
PROM1O43490 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
PROM1O43490 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PROM1O43490 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.57□□□□□ -2
PROM1O43490 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PROM1O43490 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PROM1O43490 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
PROM1O43490 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
PROM1O43490 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
PROM1O43490 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
PROM1O43490 RNU4-61P-201ENST00000411243 107 ntBASIC2.56□□□□□ -2
PROM1O43490 AC074290.1-201ENST00000448883 135 ntBASIC2.56□□□□□ -2
PROM1O43490 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
PROM1O43490 AL008718.3-201ENST00000610217 321 ntBASIC2.56□□□□□ -2
PROM1O43490 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.56□□□□□ -2
PROM1O43490 U6.115-201ENST00000636045 103 ntBASIC2.56□□□□□ -2
PROM1O43490 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
PROM1O43490 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.56□□□□□ -2
PROM1O43490 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PROM1O43490 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.55□□□□□ -2
PROM1O43490 RNU6-682P-201ENST00000363843 106 ntBASIC2.55□□□□□ -2
PROM1O43490 Y_RNA.243-201ENST00000364481 109 ntBASIC2.55□□□□□ -2
PROM1O43490 SNORD14D-201ENST00000384390 87 ntBASIC2.55□□□□□ -2
PROM1O43490 MIR300-201ENST00000401138 83 ntBASIC2.55□□□□□ -2
PROM1O43490 AC003685.2-201ENST00000422795 395 ntBASIC2.55□□□□□ -2
PROM1O43490 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
PROM1O43490 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
PROM1O43490 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
PROM1O43490 YWHAEP4-201ENST00000505390 198 ntBASIC2.55□□□□□ -2
PROM1O43490 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
PROM1O43490 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.55□□□□□ -2
PROM1O43490 AC072026.1-201ENST00000605023 201 ntBASIC2.55□□□□□ -2
PROM1O43490 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
PROM1O43490 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
PROM1O43490 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
PROM1O43490 Y_RNA.304-201ENST00000365011 112 ntBASIC2.54□□□□□ -2
PROM1O43490 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
PROM1O43490 SNORA40.19-201ENST00000390846 128 ntBASIC2.54□□□□□ -2
PROM1O43490 RNU6-763P-201ENST00000390865 106 ntBASIC2.54□□□□□ -2
PROM1O43490 PCNPP3-201ENST00000393579 471 ntBASIC2.54□□□□□ -2
PROM1O43490 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
PROM1O43490 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
PROM1O43490 RNU6-855P-201ENST00000410395 104 ntBASIC2.54□□□□□ -2
PROM1O43490 RNU6-710P-201ENST00000410424 105 ntBASIC2.54□□□□□ -2
PROM1O43490 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
PROM1O43490 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
PROM1O43490 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
PROM1O43490 AC074198.2-201ENST00000508153 258 ntBASIC2.54□□□□□ -2
PROM1O43490 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
PROM1O43490 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.54□□□□□ -2
PROM1O43490 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
PROM1O43490 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
PROM1O43490 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.54□□□□□ -2
PROM1O43490 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PROM1O43490 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PROM1O43490 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PROM1O43490 RNU6-774P-201ENST00000363238 107 ntBASIC2.53□□□□□ -2
PROM1O43490 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
PROM1O43490 Y_RNA.233-201ENST00000364407 101 ntBASIC2.53□□□□□ -2
PROM1O43490 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms