Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
SHOXO15266 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHOXO15266 RNU6-461P-201ENST00000364195 107 ntBASIC2.95□□□□□ -1.94
SHOXO15266 SNORA70.4-201ENST00000365509 134 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RNU6-1080P-201ENST00000383982 107 ntBASIC2.95□□□□□ -1.94
SHOXO15266 MIR520G-201ENST00000385064 90 ntBASIC2.95□□□□□ -1.94
SHOXO15266 Y_RNA.586-201ENST00000391146 98 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RNU2-51P-201ENST00000410708 197 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RNU2-55P-201ENST00000411146 174 ntBASIC2.95□□□□□ -1.94
SHOXO15266 SRIP3-201ENST00000413200 219 ntBASIC2.95□□□□□ -1.94
SHOXO15266 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
SHOXO15266 HMGN2P34-201ENST00000437647 269 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RPL23AP58-201ENST00000440453 469 ntBASIC2.95□□□□□ -1.94
SHOXO15266 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.95□□□□□ -1.94
SHOXO15266 SNORA25.12-201ENST00000516202 82 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RNU6-479P-201ENST00000516348 105 ntBASIC2.95□□□□□ -1.94
SHOXO15266 AC112693.2-201ENST00000556538 232 ntBASIC2.95□□□□□ -1.94
SHOXO15266 AC087499.8-201ENST00000578406 226 ntBASIC2.95□□□□□ -1.94
SHOXO15266 LARP7P3-201ENST00000579888 337 ntBASIC2.95□□□□□ -1.94
SHOXO15266 U2.20-201ENST00000613956 192 ntBASIC2.95□□□□□ -1.94
SHOXO15266 U6.73-201ENST00000619194 103 ntBASIC2.95□□□□□ -1.94
SHOXO15266 RNA5SP196-201ENST00000625967 102 ntBASIC2.95□□□□□ -1.94
SHOXO15266 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SHOXO15266 SNORD45.3-201ENST00000363836 72 ntBASIC2.94□□□□□ -1.94
SHOXO15266 Y_RNA.203-201ENST00000364106 102 ntBASIC2.94□□□□□ -1.94
SHOXO15266 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.94□□□□□ -1.94
SHOXO15266 Y_RNA.393-201ENST00000383936 102 ntBASIC2.94□□□□□ -1.94
SHOXO15266 Y_RNA.587-201ENST00000391210 103 ntBASIC2.94□□□□□ -1.94
SHOXO15266 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.94□□□□□ -1.94
SHOXO15266 RPS15AP28-201ENST00000435088 386 ntBASIC2.94□□□□□ -1.94
SHOXO15266 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
SHOXO15266 AC104619.4-201ENST00000510773 249 ntBASIC2.94□□□□□ -1.94
SHOXO15266 RNA5SP76-201ENST00000516277 87 ntBASIC2.94□□□□□ -1.94
SHOXO15266 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.94□□□□□ -1.94
SHOXO15266 MIR5187-201ENST00000583479 76 ntBASIC2.94□□□□□ -1.94
SHOXO15266 MIR3658-201ENST00000636291 56 ntBASIC2.94□□□□□ -1.94
SHOXO15266 MIR6844-201ENST00000637122 62 ntBASIC2.94□□□□□ -1.94
SHOXO15266 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
SHOXO15266 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOXO15266 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHOXO15266 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.93□□□□□ -1.94
SHOXO15266 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHOXO15266 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHOXO15266 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.93□□□□□ -1.94
SHOXO15266 Y_RNA.99-201ENST00000363138 105 ntBASIC2.93□□□□□ -1.94
SHOXO15266 Y_RNA.432-201ENST00000384087 111 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU6-22P-201ENST00000384355 107 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU6-257P-201ENST00000410238 98 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU2-48P-201ENST00000410694 191 ntBASIC2.93□□□□□ -1.94
SHOXO15266 Y_RNA.622-201ENST00000411091 108 ntBASIC2.93□□□□□ -1.94
SHOXO15266 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SHOXO15266 AC063976.3-201ENST00000426849 329 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RPS29P7-201ENST00000439662 171 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RPS4XP11-201ENST00000446897 772 ntBASIC2.93□□□□□ -1.94
SHOXO15266 AL133162.1-201ENST00000463228 453 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU2-27P-201ENST00000516185 142 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU6-561P-201ENST00000516222 102 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU1-143P-201ENST00000516296 146 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU6-313P-201ENST00000516317 112 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU6-126P-201ENST00000516685 103 ntBASIC2.93□□□□□ -1.94
SHOXO15266 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.93□□□□□ -1.94
SHOXO15266 MIR5685-201ENST00000579080 79 ntBASIC2.93□□□□□ -1.94
SHOXO15266 MIR3117-201ENST00000584034 78 ntBASIC2.93□□□□□ -1.94
SHOXO15266 AC007229.1-201ENST00000590455 412 ntBASIC2.93□□□□□ -1.94
SHOXO15266 AL021707.8-201ENST00000609428 183 ntBASIC2.93□□□□□ -1.94
SHOXO15266 U1.23-201ENST00000610293 146 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RNU1-68P-201ENST00000615382 146 ntBASIC2.93□□□□□ -1.94
SHOXO15266 U4atac.1-201ENST00000618345 95 ntBASIC2.93□□□□□ -1.94
SHOXO15266 U1.39-201ENST00000621562 146 ntBASIC2.93□□□□□ -1.94
SHOXO15266 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
SHOXO15266 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHOXO15266 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOXO15266 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SHOXO15266 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
SHOXO15266 snoU2-30.2-201ENST00000362805 70 ntBASIC2.92□□□□□ -1.94
SHOXO15266 SNORA25B-201ENST00000365507 128 ntBASIC2.92□□□□□ -1.94
SHOXO15266 RNU6-136P-201ENST00000384663 107 ntBASIC2.92□□□□□ -1.94
SHOXO15266 MIR592-201ENST00000384959 97 ntBASIC2.92□□□□□ -1.94
SHOXO15266 MIR634-201ENST00000385208 97 ntBASIC2.92□□□□□ -1.94
SHOXO15266 SNORA75.5-201ENST00000391291 81 ntBASIC2.92□□□□□ -1.94
SHOXO15266 MIR1278-201ENST00000408753 81 ntBASIC2.92□□□□□ -1.94
SHOXO15266 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.92□□□□□ -1.94
SHOXO15266 RNU6-1299P-201ENST00000516316 100 ntBASIC2.92□□□□□ -1.94
SHOXO15266 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
SHOXO15266 AC011604.1-201ENST00000545978 196 ntBASIC2.92□□□□□ -1.94
SHOXO15266 AL160236.1-201ENST00000556317 195 ntBASIC2.92□□□□□ -1.94
SHOXO15266 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.92□□□□□ -1.94
SHOXO15266 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOXO15266 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOXO15266 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOXO15266 MIR539-201ENST00000365690 78 ntBASIC2.91□□□□□ -1.94
SHOXO15266 MIR449B-201ENST00000384995 97 ntBASIC2.91□□□□□ -1.94
SHOXO15266 SNORA26-201ENST00000391286 122 ntBASIC2.91□□□□□ -1.94
SHOXO15266 MTATP6P29-201ENST00000415057 132 ntBASIC2.91□□□□□ -1.94
SHOXO15266 AC060773.1-201ENST00000421698 310 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms