Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC125232.2-201ENST00000592457 143 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 AC022432.1-201ENST00000595739 310 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.35□□□□□ -2.19
PDLIM1O00151 AC099654.14-201ENST00000638599 341 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 ICE2P2-201ENST00000483823 2787 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
PDLIM1O00151 Y_RNA.498-201ENST00000384460 102 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC138393.2-201ENST00000414742 246 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC114482.1-201ENST00000418010 247 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 TOMM22P2-201ENST00000430735 237 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC005002.2-201ENST00000438228 269 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 PCNPP5-201ENST00000452246 481 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 SNORD65B-201ENST00000459126 73 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 U8.22-201ENST00000459141 133 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 MIR2053-201ENST00000459295 91 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 RNU7-34P-201ENST00000459394 64 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.34□□□□□ -2.19
PDLIM1O00151 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC104260.1-201ENST00000616660 539 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
PDLIM1O00151 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
PDLIM1O00151 RNA5SP361-201ENST00000362686 118 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 RNU6-1145P-201ENST00000384246 107 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PDLIM1O00151 RPS26P45-201ENST00000471748 340 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 RPS27P22-201ENST00000478056 241 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 SNORA20.3-201ENST00000516880 132 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 AL355073.2-201ENST00000612106 557 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 U6.73-201ENST00000619194 103 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.33□□□□□ -2.2
PDLIM1O00151 RNU6-203P-201ENST00000384038 104 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 SNORA67.6-201ENST00000391093 99 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 RPL21P1-201ENST00000399532 476 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 Y_RNA.646-201ENST00000410980 101 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AL603825.1-201ENST00000438481 80 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.32□□□□□ -2.2
PDLIM1O00151 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 RPL30P15-201ENST00000457129 321 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.32□□□□□ -2.2
PDLIM1O00151 AC010469.2-201ENST00000496412 480 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AC010598.1-201ENST00000510378 103 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 RNU6-120P-201ENST00000516077 103 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 RNU6-559P-201ENST00000516151 98 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 MIR4438-201ENST00000585271 93 ntBASIC1.32□□□□□ -2.2
PDLIM1O00151 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.32□□□□□ -2.2
PDLIM1O00151 AC073544.1-201ENST00000600110 1595 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU6-1188P-201ENST00000363795 107 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU6-1264P-201ENST00000383891 107 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU6-950P-201ENST00000384651 107 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU6-310P-201ENST00000384655 107 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 MIR625-201ENST00000385047 85 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU4-62P-201ENST00000410125 130 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 ELOCP21-201ENST00000412558 336 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RBMX2P4-201ENST00000441256 376 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AC022493.2-201ENST00000506122 481 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AC074133.1-201ENST00000515696 183 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 RNU7-99P-201ENST00000516271 62 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.31□□□□□ -2.2
PDLIM1O00151 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.31□□□□□ -2.2
PDLIM1O00151 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.31□□□□□ -2.2
PDLIM1O00151 AC113139.1-201ENST00000605049 239 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AL357075.2-201ENST00000614906 189 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 U6.108-201ENST00000637764 58 ntBASIC1.31□□□□□ -2.2
PDLIM1O00151 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.3□□□□□ -2.2
PDLIM1O00151 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 Y_RNA.142-201ENST00000363491 102 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 Y_RNA.390-201ENST00000383932 102 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 MTCYBP4-201ENST00000401524 249 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 RNU6-1156P-201ENST00000410365 100 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 RNA5SP475-201ENST00000410568 110 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 AL606517.2-201ENST00000442855 241 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.3□□□□□ -2.2
PDLIM1O00151 AC079140.2-201ENST00000506193 142 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.3□□□□□ -2.2
PDLIM1O00151 RN7SKP49-201ENST00000516675 260 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 AC018448.1-201ENST00000552843 316 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 AC005730.3-201ENST00000583067 366 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PDLIM1O00151 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 AL050343.2-201ENST00000607338 280 ntBASIC1.3□□□□□ -2.2
PDLIM1O00151 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PDLIM1O00151 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PDLIM1O00151 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 RNU6-890P-201ENST00000384121 107 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 Y_RNA.577-201ENST00000384794 101 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms