Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU1-148P-201ENST00000384472 162 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AL355796.1-201ENST00000406706 323 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AL603910.2-201ENST00000407268 136 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 MIR1262-201ENST00000408276 93 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 SNORD65B-201ENST00000459126 73 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AC091959.1-201ENST00000495857 238 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 SNORA70.12-201ENST00000516084 153 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 RNU6-191P-201ENST00000516295 94 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 SNORA27.4-201ENST00000516650 95 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 DEFB117-201ENST00000602356 141 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 Y_RNA.275-201ENST00000364726 110 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 SNORA20.1-201ENST00000364790 130 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 RNU6-514P-201ENST00000384208 107 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 MIR873-201ENST00000401120 77 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 AL353689.1-201ENST00000438895 199 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 RN7SL636P-201ENST00000497504 294 ntBASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC85CA6NKD9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNU1-17P-201ENST00000363022 152 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNU4-80P-201ENST00000363200 141 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNY1-201ENST00000364228 113 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNU1-91P-201ENST00000364746 163 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 SNORA20B-201ENST00000384220 132 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 SNORD14D-201ENST00000384390 87 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 SNORA64-201ENST00000384674 134 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 RNU6-710P-201ENST00000410424 105 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC024067.1-201ENST00000426199 223 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC108059.2-201ENST00000434626 151 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 CR769767.1-201ENST00000436337 346 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 SNORA4.4-201ENST00000515921 135 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC026271.5-201ENST00000577873 130 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC010900.2-201ENST00000604508 210 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 AC141273.2-201ENST00000618989 130 ntBASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC85CA6NKD9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 SNORA27.1-201ENST00000362604 124 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 RNU6-271P-201ENST00000363858 105 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 AC245102.2-201ENST00000448956 180 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 RPL23AP7-203ENST00000449021 469 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 RNA5SP137-201ENST00000516833 135 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 SUMO2P18-201ENST00000518873 252 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 AC005357.1-201ENST00000588399 301 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 AL353149.1-201ENST00000610667 244 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.15-201ENST00000611544 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.16-201ENST00000613119 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.12-201ENST00000613778 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.20-201ENST00000613956 192 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.9-201ENST00000615427 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.11-201ENST00000616345 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.2-201ENST00000616535 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.3-201ENST00000617785 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.19-201ENST00000618602 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 RNU2-1-201ENST00000618664 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.6-201ENST00000619225 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.5-201ENST00000619465 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 U2.10-201ENST00000620268 191 ntBASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC85CA6NKD9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.82-201ENST00000363000 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.92-201ENST00000363043 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 RNU6-324P-201ENST00000363957 106 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.235-201ENST00000364412 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.306-201ENST00000365015 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.312-201ENST00000365089 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.322-201ENST00000365151 102 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.477-201ENST00000384352 108 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.552-201ENST00000384665 112 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3□□□□□ -1.93
CCDC85CA6NKD9 HSPE1P13-201ENST00000451143 297 ntBASIC3□□□□□ -1.93
CCDC85CA6NKD9 Y_RNA.650-201ENST00000459002 102 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms