Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 AP003357.1-201ENST00000604497 148 ntBASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 YPEL5P2-201ENST00000605553 359 ntBASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 MIR338-201ENST00000636369 67 ntBASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRAV20A0A0B4J274 RNA5SP493-201ENST00000364115 91 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 RNA5SP42-201ENST00000364278 115 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 MIR634-201ENST00000385208 97 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-1186P-201ENST00000410429 97 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 SNORA36B-201ENST00000410438 131 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 AL162725.1-201ENST00000435405 301 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 RPL39P40-201ENST00000445481 146 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 AC021269.2-201ENST00000532318 330 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 AL353149.1-201ENST00000610667 244 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 MIR7112-201ENST00000616126 65 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 MIR8057-201ENST00000620957 69 ntBASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRAV20A0A0B4J274 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 Y_RNA.7-201ENST00000362352 102 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-1164P-201ENST00000364428 107 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 Y_RNA.571-201ENST00000384753 98 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 MIR626-201ENST00000385032 94 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 PCNPP3-201ENST00000393579 471 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 EBAG9P1-201ENST00000418955 543 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 RPL23AP67-201ENST00000465341 474 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 RPL23AP54-201ENST00000495129 419 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 AC107934.2-201ENST00000518653 310 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 AC127455.1-201ENST00000565496 145 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 MIR5680-201ENST00000577577 84 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 AC007229.1-201ENST00000590455 412 ntBASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRAV20A0A0B4J274 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 MIR367-201ENST00000362299 68 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 Y_RNA.24-201ENST00000362508 103 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-23P-201ENST00000363283 107 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 MIR526A2-201ENST00000390198 65 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RNU2-2P-201ENST00000410396 191 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 AL109933.2-201ENST00000452651 260 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 YWHAEP4-201ENST00000505390 198 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 Y_RNA.662-201ENST00000516028 97 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 MIR4724-201ENST00000579485 89 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 LARP7P3-201ENST00000579888 337 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 AL031274.2-201ENST00000599419 203 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RNU2-4P-201ENST00000606190 192 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
TRAV20A0A0B4J274 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RNU1-96P-201ENST00000364163 162 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 Y_RNA.238-201ENST00000364441 102 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-1062P-201ENST00000383908 107 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 MIR29C-201ENST00000385231 88 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-381P-201ENST00000391259 108 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RNA5SP467-201ENST00000391274 118 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RNU6-1219P-201ENST00000516143 112 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 SNORA70.19-201ENST00000516717 90 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 MIR3169-201ENST00000578032 83 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 MIR5004-201ENST00000579078 107 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 AC073413.2-201ENST00000604332 360 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 AL359075.3-201ENST00000613288 217 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 U6.106-201ENST00000636360 105 ntBASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV20A0A0B4J274 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-969P-201ENST00000383900 105 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.572-201ENST00000384757 98 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 RN7SKP51-201ENST00000410781 304 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC074198.2-201ENST00000508153 258 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 RN7SKP164-201ENST00000516138 266 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 RNU7-99P-201ENST00000516271 62 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC026333.2-201ENST00000542164 106 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 MIR5688-201ENST00000580619 83 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 AC068647.1-201ENST00000489539 2265 ntBASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRAV20A0A0B4J274 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms