Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SF3B6Q9Y3B4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SF3B6Q9Y3B4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.97□□□□□ -1.93
SF3B6Q9Y3B4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SF3B6Q9Y3B4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SF3B6Q9Y3B4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
SF3B6Q9Y3B4 RNA5SP125-201ENST00000364843 120 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-728P-201ENST00000365375 104 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-643P-201ENST00000384018 107 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 MIR592-201ENST00000384959 97 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 SNORA11-201ENST00000408789 128 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC106707.2-201ENST00000484182 374 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC018868.1-201ENST00000491307 315 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC104619.4-201ENST00000510773 249 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC091826.1-201ENST00000514065 313 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AC097462.1-201ENST00000514125 324 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 SNORA25.12-201ENST00000516202 82 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-667P-201ENST00000517186 102 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 MIR548X2-201ENST00000579776 100 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AL031274.2-201ENST00000599419 203 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 AL356274.2-201ENST00000624379 3752 ntBASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SF3B6Q9Y3B4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 RNU4-41P-201ENST00000364426 143 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 MIR561-201ENST00000385216 97 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 MIR1253-201ENST00000408273 105 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 RPS29P4-201ENST00000414733 161 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC060773.1-201ENST00000421698 310 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC010154.1-201ENST00000425857 269 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AP001486.1-201ENST00000463339 476 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-856P-201ENST00000516959 98 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 RNU7-172P-201ENST00000517125 64 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 MIR4429-201ENST00000580105 73 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AL929325.1-201ENST00000603096 117 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 U3.45-201ENST00000607547 219 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 MIR6075-201ENST00000620782 95 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 AC009093.8-201ENST00000641769 292 ntBASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SF3B6Q9Y3B4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 ZNF702P-202ENST00000434269 1966 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AC008264.2-201ENST00000610193 3731 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AC100821.1-201ENST00000523153 2479 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 MIR7-3-201ENST00000384898 110 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 MIR670-201ENST00000390142 98 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 Y_RNA.586-201ENST00000391146 98 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-257P-201ENST00000410238 98 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AC003685.2-201ENST00000422795 395 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 AC244505.4-201ENST00000434905 287 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 CST9LP2-201ENST00000437612 320 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 SSXP5-201ENST00000443473 287 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 RPS4XP11-201ENST00000446897 772 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 MIR548AI-201ENST00000579940 88 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 U2.20-201ENST00000613956 192 ntBASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.94□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-674P-201ENST00000363831 107 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 SNORA72-201ENST00000384339 132 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 SNORA20-201ENST00000384662 132 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-376P-201ENST00000384731 106 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 SNORA46-201ENST00000384762 135 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 RN7SKP111-201ENST00000410349 271 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 RPL32P35-201ENST00000415214 394 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 AL513477.1-202ENST00000417061 214 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 HMGN2P34-201ENST00000437647 269 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SF3B6Q9Y3B4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNU1-70P-201ENST00000362618 164 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-199P-201ENST00000362954 107 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 SNORD45.3-201ENST00000363836 72 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-1117P-201ENST00000384525 104 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-959P-201ENST00000384671 107 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-417P-201ENST00000384712 107 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 MIR513C-201ENST00000401352 84 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RNA5SP229-201ENST00000410809 99 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 RN7SKP101-201ENST00000411376 320 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 CYCSP4-201ENST00000429682 331 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 SNRPGP8-201ENST00000454064 226 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 MIR92B-201ENST00000607575 96 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms