Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 U8.2-201ENST00000363156 134 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.287-201ENST00000364853 94 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 MIR504-201ENST00000385065 83 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-763P-201ENST00000390865 106 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-57P-201ENST00000411348 103 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC022559.1-201ENST00000520905 205 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC136628.3-201ENST00000521868 290 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC022616.8-201ENST00000533569 253 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 MIR5692C2-201ENST00000577959 77 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 AL078604.3-201ENST00000615580 211 ntBASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNRF3Q9ULT6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 ZNF658B-202ENST00000615961 3375 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 RNU1-35P-201ENST00000362782 153 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-682P-201ENST00000363843 106 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.233-201ENST00000364407 101 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.341-201ENST00000365341 102 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-975P-201ENST00000384296 105 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 SNORD14D-201ENST00000384390 87 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.662-201ENST00000516028 97 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 RNA5SP490-201ENST00000517141 136 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNRF3Q9ULT6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.361-201ENST00000365515 120 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-918P-201ENST00000391219 106 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 PCNPP3-201ENST00000393579 471 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 AC016925.1-201ENST00000458303 298 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 Y_RNA.637-201ENST00000459424 114 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 RNU6-948P-201ENST00000516374 107 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 CTSLP2-204ENST00000629029 392 ntBASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNRF3Q9ULT6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 AC009487.4-201ENST00000624969 3585 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 RNU6-271P-201ENST00000363858 105 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 RNU6-743P-201ENST00000364151 106 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 Y_RNA.368-201ENST00000365547 113 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 RNU4-17P-201ENST00000365598 141 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 Y_RNA.456-201ENST00000384232 111 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 Y_RNA.464-201ENST00000384282 110 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 MIR873-201ENST00000401120 77 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 snoU13.15-201ENST00000459407 104 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 RNU6-221P-201ENST00000459541 99 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 HMGB3P3-201ENST00000510526 400 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 SNORA48.11-201ENST00000517015 89 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 AC025754.2-201ENST00000606491 432 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.27□□□□□ -1.89
ZNRF3Q9ULT6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RNU6-653P-201ENST00000363074 106 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RNU6-801P-201ENST00000364087 105 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 Y_RNA.435-201ENST00000384095 112 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 SNORA72.4-201ENST00000384174 132 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 MIR95-201ENST00000385072 81 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RNU4-61P-201ENST00000411243 107 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AC016717.1-201ENST00000448918 286 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 MIR4308-201ENST00000580634 81 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 MIR4524B-201ENST00000581569 115 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AL356280.1-201ENST00000603614 379 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AL355297.2-201ENST00000604792 129 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 MIR1248-201ENST00000629190 106 ntBASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNRF3Q9ULT6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNRF3Q9ULT6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNRF3Q9ULT6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 414.1 ms