Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Y_RNA.214-201ENST00000364201 112 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.307-201ENST00000365022 117 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNU1-115P-201ENST00000365329 160 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RPL21P1-201ENST00000399532 476 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNU6-130P-201ENST00000411112 103 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 U8.22-201ENST00000459141 133 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RPS29P27-201ENST00000463711 170 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 RNU6-397P-201ENST00000516226 104 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AC124312.5-201ENST00000604451 268 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 U4.1-201ENST00000620349 87 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
CLIP2Q9UDT6 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RNU6-379P-201ENST00000363813 104 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RNU4-56P-201ENST00000364700 142 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RNU6-702P-201ENST00000364982 107 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.483-201ENST00000384380 101 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 MIR521-1-201ENST00000384902 87 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AL590135.1-201ENST00000422215 156 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC019205.3-201ENST00000424573 156 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC016700.2-201ENST00000446011 156 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RPL9P9-202ENST00000466501 579 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 RPL17P19-201ENST00000489069 552 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC015911.1-201ENST00000495111 156 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC091874.1-201ENST00000511402 339 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC004817.2-201ENST00000561794 651 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC090517.1-201ENST00000569307 266 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AC006600.1-201ENST00000572529 153 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 MIR5701-3-201ENST00000578890 82 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 MIR5701-1-201ENST00000585138 82 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 AL021879.1-201ENST00000611756 288 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 MIR5701-2-201ENST00000615634 82 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 U2.1-201ENST00000618978 145 ntBASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC117470.1-201ENST00000381974 330 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AL357139.1-201ENST00000407792 426 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNA5SP201-201ENST00000410316 124 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-121P-201ENST00000410525 99 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNA5SP494-201ENST00000410653 129 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 Z82188.1-201ENST00000436709 154 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC079354.2-201ENST00000453523 154 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC098869.1-201ENST00000481627 292 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC016632.1-201ENST00000503994 196 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-970P-201ENST00000516312 107 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-388P-201ENST00000517012 105 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-389P-201ENST00000517048 105 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.715-201ENST00000517082 110 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RNU6-264P-201ENST00000517134 104 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC040926.1-201ENST00000530195 238 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 HSPE1P4-201ENST00000550617 308 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AL161670.1-201ENST00000554348 137 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 RMST_6.1-201ENST00000611980 203 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 AC078938.1-201ENST00000620993 318 ntBASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.39-201ENST00000362620 98 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 RNU6-596P-201ENST00000365395 98 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MIR487A-201ENST00000385009 80 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 RNU6-101P-201ENST00000410323 104 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AP000275.1-201ENST00000411943 390 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 RPL21P38-201ENST00000418090 167 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC092423.1-201ENST00000430165 186 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 USP9YP16-201ENST00000430287 407 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 DAP3P1-201ENST00000441522 278 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 USP9YP23-201ENST00000455085 407 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 SNRPGP7-201ENST00000469016 106 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 SNORA31.16-201ENST00000516773 139 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 MRPS36P4-201ENST00000534436 298 ntBASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
CLIP2Q9UDT6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms