Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.86□□□□□ -1.79
CUEDC1Q9NWM3 MAPK10-362ENST00000641864 4484 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP399-201ENST00000364003 117 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-117P-201ENST00000365415 107 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RNU1-89P-201ENST00000384592 164 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 MIR1283-1-201ENST00000408494 87 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 MIR1289-1-201ENST00000408836 144 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 AL500522.2-201ENST00000448562 343 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RBMY2UP-201ENST00000453474 324 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-63P-201ENST00000516690 95 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 IGKV3-31-201ENST00000523109 329 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 MIR5009-201ENST00000578736 100 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 MALAT1.1-201ENST00000618249 95 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 AC012314.7-201ENST00000619693 93 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 AC000403.1-201ENST00000613696 3585 ntBASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CUEDC1Q9NWM3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-486P-201ENST00000363116 107 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 Y_RNA.486-201ENST00000384398 107 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 MIR181A2-201ENST00000384863 110 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 AL031121.1-201ENST00000406553 254 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-109P-201ENST00000516364 107 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 RNU6-184P-201ENST00000516514 107 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 SNORA70.24-201ENST00000517233 118 ntBASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
CUEDC1Q9NWM3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CUEDC1Q9NWM3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CUEDC1Q9NWM3 AC009487.4-201ENST00000624969 3585 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 SNORD32B-201ENST00000364460 84 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 RNU1-57P-201ENST00000384491 166 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 MIR34B-201ENST00000385076 84 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 AC079598.5-201ENST00000547460 117 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 AC103810.1-201ENST00000579873 453 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 MIR3129-201ENST00000581095 76 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 MIR4753-201ENST00000585119 83 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 AC091167.4-201ENST00000605079 184 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 AC096577.2-201ENST00000611455 153 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 AC073346.2-201ENST00000624724 2058 ntBASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CUEDC1Q9NWM3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.93-201ENST00000363066 109 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 MIR181B1-201ENST00000385240 110 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 MIR1251-201ENST00000408552 70 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 RNU2-32P-201ENST00000411193 191 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 RNA5SP179-201ENST00000517284 121 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 AC026421.1-201ENST00000519101 163 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 MIR6500-201ENST00000622700 86 ntBASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.82□□□□□ -1.8
CUEDC1Q9NWM3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 MIR302B-201ENST00000362188 73 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 SNORA12-201ENST00000391162 147 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 RN7SL271P-201ENST00000487601 295 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-904P-201ENST00000516206 101 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 AC068339.1-201ENST00000526965 141 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 AL591424.2-201ENST00000617023 128 ntBASIC3.81□□□□□ -1.8
CUEDC1Q9NWM3 AL590808.1-201ENST00000618696 141 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms