Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
POLE3Q9NRF9 AC091144.1-201ENST00000519573 138 ntBASIC1.04□□□□□ -2.24
POLE3Q9NRF9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.04□□□□□ -2.24
POLE3Q9NRF9 AC136932.1-201ENST00000574771 208 ntBASIC1.04□□□□□ -2.24
POLE3Q9NRF9 AC104984.5-201ENST00000586878 94 ntBASIC1.04□□□□□ -2.24
POLE3Q9NRF9 AC010999.1-201ENST00000611856 324 ntBASIC1.04□□□□□ -2.24
POLE3Q9NRF9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
POLE3Q9NRF9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
POLE3Q9NRF9 Y_RNA.38-201ENST00000362617 102 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 RNU4-79P-201ENST00000362764 141 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 RNY3P3-201ENST00000363816 102 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 Y_RNA.414-201ENST00000384011 101 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 RNU6-306P-201ENST00000384617 107 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 RNU2-16P-201ENST00000410712 136 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.03□□□□□ -2.24
POLE3Q9NRF9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.03□□□□□ -2.24
POLE3Q9NRF9 AC010598.1-201ENST00000510378 103 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.03□□□□□ -2.24
POLE3Q9NRF9 MIR5696-201ENST00000578474 85 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 AC006435.5-201ENST00000624486 112 ntBASIC1.03□□□□□ -2.24
POLE3Q9NRF9 RNU6-451P-201ENST00000362921 107 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RNA5SP99-201ENST00000364020 114 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 MIR10B-201ENST00000385011 110 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RNU11-5P-201ENST00000391216 129 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RNU6-322P-201ENST00000516010 103 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RNA5SP168-201ENST00000516642 112 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 RPL21P9-201ENST00000556149 474 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 MIR4298-201ENST00000584380 73 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 MIR6715A-201ENST00000615929 79 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 MIR6079-201ENST00000635807 62 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 MIR1321-201ENST00000637766 79 ntBASIC1.02□□□□□ -2.25
POLE3Q9NRF9 SNORD116-11-201ENST00000383882 92 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AL451046.2-201ENST00000403074 277 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AL355796.1-201ENST00000406706 323 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AC243428.1-201ENST00000421099 264 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 USMG5P1-201ENST00000425964 177 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.01□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.683-201ENST00000516508 93 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 RNU2-56P-201ENST00000516826 190 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 RNU6-273P-201ENST00000516937 96 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 RNU7-172P-201ENST00000517125 64 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AC090049.2-201ENST00000550377 109 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
POLE3Q9NRF9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.01□□□□□ -2.25
POLE3Q9NRF9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
POLE3Q9NRF9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
POLE3Q9NRF9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
POLE3Q9NRF9 AL391987.6-201ENST00000305671 199 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 RNU6-1054P-201ENST00000411293 104 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1□□□□□ -2.25
POLE3Q9NRF9 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 CALM2P4-201ENST00000430810 426 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1□□□□□ -2.25
POLE3Q9NRF9 RNU6-314P-201ENST00000516574 104 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1□□□□□ -2.25
POLE3Q9NRF9 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.267-201ENST00000364679 109 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 MTCO3P19-201ENST00000415864 321 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 RPL39P39-201ENST00000455840 151 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AC093852.1-201ENST00000503587 266 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AC097462.1-201ENST00000514125 324 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 RN7SKP49-201ENST00000516675 260 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.99□□□□□ -2.25
POLE3Q9NRF9 AC080078.2-201ENST00000603766 501 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 ZNF299P-201ENST00000406845 1804 ntBASIC0.99□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.140-201ENST00000363474 103 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 Y_RNA.559-201ENST00000384686 107 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 MIR653-201ENST00000385279 96 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 SNORD41-201ENST00000386967 70 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 U8.16-201ENST00000391279 133 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 USP9YP16-201ENST00000430287 407 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 MTND3P23-201ENST00000431980 347 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.98□□□□□ -2.25
POLE3Q9NRF9 MTND1P29-201ENST00000448112 647 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 USP9YP23-201ENST00000455085 407 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.98□□□□□ -2.25
POLE3Q9NRF9 AL357312.1-201ENST00000603879 298 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
POLE3Q9NRF9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
POLE3Q9NRF9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 RNU6-424P-201ENST00000384367 105 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 MIR562-201ENST00000384894 95 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 SNORD12-201ENST00000391002 90 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms