Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU6-250P-201ENST00000516958 103 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX4Q9NQI0 MIR3683-201ENST00000580847 82 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 AC006504.6-201ENST00000590142 199 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 AL390123.1-201ENST00000603216 237 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.17□□□□□ -2.06
DDX4Q9NQI0 AL078596.1-201ENST00000624856 447 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
DDX4Q9NQI0 U3.8-201ENST00000363675 217 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.216-201ENST00000364205 93 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 SNORA67.2-201ENST00000384300 149 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 MIR29C-201ENST00000385231 88 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 MRPL35P1-201ENST00000404272 572 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 AC123900.1-201ENST00000420390 96 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.16□□□□□ -2.06
DDX4Q9NQI0 PCNPP5-201ENST00000452246 481 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 RNU1-117P-201ENST00000517041 158 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 AC040926.1-201ENST00000530195 238 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 MZT1P2-201ENST00000604387 248 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
DDX4Q9NQI0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
DDX4Q9NQI0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.16□□□□□ -2.06
DDX4Q9NQI0 RNU6-727P-201ENST00000363592 107 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 SNORA51.11-201ENST00000384442 131 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 SNORA40.19-201ENST00000390846 128 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 RNU6-101P-201ENST00000410323 104 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.15□□□□□ -2.07
DDX4Q9NQI0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
DDX4Q9NQI0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.15□□□□□ -2.07
DDX4Q9NQI0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.15□□□□□ -2.07
DDX4Q9NQI0 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 AL121655.1-201ENST00000605811 308 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 U6.92-201ENST00000636464 89 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 AC091812.1-201ENST00000432235 1948 ntBASIC2.15□□□□□ -2.07
DDX4Q9NQI0 RNU6-545P-201ENST00000362681 104 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 RNA5SP504-201ENST00000410676 117 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 AC107393.1-201ENST00000512403 346 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 SNORA40.9-201ENST00000515895 93 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 AC233702.2-202ENST00000562547 291 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 AC040896.1-201ENST00000613819 479 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.14□□□□□ -2.07
DDX4Q9NQI0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DDX4Q9NQI0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
DDX4Q9NQI0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.380-201ENST00000365663 111 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.389-201ENST00000383924 113 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-975P-201ENST00000384296 105 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.485-201ENST00000384395 102 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-160P-201ENST00000384591 107 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 TOMM22P2-201ENST00000430735 237 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-498P-201ENST00000459468 107 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 RNU6-948P-201ENST00000516374 107 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AC087441.2-201ENST00000529141 262 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 MIR4680-201ENST00000580906 66 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AC010205.1-201ENST00000616668 449 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AC007742.2-201ENST00000618226 398 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 AC091932.3-201ENST00000624223 323 ntBASIC2.13□□□□□ -2.07
DDX4Q9NQI0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX4Q9NQI0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.455-201ENST00000384230 98 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 Y_RNA.645-201ENST00000391229 102 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.12□□□□□ -2.07
DDX4Q9NQI0 RNU6-625P-201ENST00000459412 107 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 U8.20-201ENST00000459445 131 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AC067942.3-201ENST00000512025 362 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AC018448.1-201ENST00000552843 316 ntBASIC2.12□□□□□ -2.07
DDX4Q9NQI0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms