Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 SNORA1-201ENST00000384107 130 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 MIR624-201ENST00000385217 97 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 AC025750.2-201ENST00000442609 450 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 RN7SL601P-201ENST00000471221 293 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 SNORA18.4-201ENST00000516440 124 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 RNU7-172P-201ENST00000517125 64 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 AC018630.3-201ENST00000542637 96 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 PRELID2P1-201ENST00000552837 301 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 MIR4438-201ENST00000585271 93 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 AC244205.2-202ENST00000635781 342 ntBASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEUROD4Q9HD90 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 SNORA63.1-201ENST00000362493 131 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.116-201ENST00000363292 103 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 RNU6-880P-201ENST00000384526 107 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 MIR1289-1-201ENST00000408836 144 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 RNA5SP127-201ENST00000411051 133 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 AL513477.1-202ENST00000417061 214 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 AC008134.1-201ENST00000420943 193 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 NDUFA4P2-201ENST00000489989 244 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 OR9P1P-201ENST00000496431 281 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.694-201ENST00000516677 117 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 AL365205.2-201ENST00000594586 68 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 SNORA51-201ENST00000606420 132 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 uc_338.28-201ENST00000612082 187 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 MIR6500-201ENST00000622700 86 ntBASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEUROD4Q9HD90 AC093010.3-201ENST00000570269 15214 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 FAM35DP-201ENST00000323387 2712 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AC009487.4-201ENST00000624969 3585 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AL035425.3-201ENST00000564206 4996 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.346-201ENST00000365385 112 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 RNA5SP236-201ENST00000516169 116 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 RNU6-586P-201ENST00000517265 104 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 RNU1-104P-201ENST00000517280 175 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 AC039056.2-201ENST00000622261 511 ntBASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NEUROD4Q9HD90 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.84
NEUROD4Q9HD90 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 RNU6-438P-201ENST00000365561 103 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 RNU6-106P-201ENST00000384405 107 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 RPS12P18-201ENST00000442381 270 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 AL021397.1-201ENST00000451806 248 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 PRSS3P4-201ENST00000453323 162 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 AC023449.1-201ENST00000454464 154 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 MIR3129-201ENST00000581095 76 ntBASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEUROD4Q9HD90 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 SNORD21-201ENST00000383953 95 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 MIR483-201ENST00000385070 76 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 MIR1263-201ENST00000408324 86 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 AC019176.2-201ENST00000611579 315 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 MAPK10-266ENST00000641066 6555 ntBASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEUROD4Q9HD90 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 MIR340-201ENST00000362125 95 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 SNORA26-201ENST00000391286 122 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 AF228730.3-201ENST00000436691 102 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 AL031737.1-201ENST00000450125 223 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 AL133162.1-201ENST00000463228 453 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 RNA5SP208-201ENST00000516156 78 ntBASIC3.56□□□□□ -1.84
NEUROD4Q9HD90 RN7SKP83-201ENST00000516512 178 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms