Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RPL39P28-201ENST00000465655 155 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AP000870.1-201ENST00000472927 406 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AC010469.2-201ENST00000496412 480 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 RNU7-175P-201ENST00000515915 61 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AP000889.1-201ENST00000530968 660 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 UBL5P4-201ENST00000562584 236 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 ZNF299P-201ENST00000406845 1804 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU4-38P-201ENST00000364472 129 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU4-62P-201ENST00000410125 130 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AL445305.1-201ENST00000432577 575 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC002429.1-201ENST00000437672 148 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 MTND1P1-201ENST00000445453 368 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU7-95P-201ENST00000459222 64 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC087343.1-201ENST00000477341 475 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC022493.2-201ENST00000506122 481 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-917P-201ENST00000516294 104 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNA5SP168-201ENST00000516642 112 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU2-56P-201ENST00000516826 190 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-341P-201ENST00000516973 96 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU7-172P-201ENST00000517125 64 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC026407.1-201ENST00000518369 204 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC091144.1-201ENST00000519573 138 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AL590705.4-201ENST00000532209 134 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC023157.2-201ENST00000540596 141 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RPL21P9-201ENST00000556149 474 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.64□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-483P-201ENST00000384088 108 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA17.3-201ENST00000391159 129 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 OR9P1P-201ENST00000496431 281 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 AC046134.1-201ENST00000514454 666 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA70.12-201ENST00000516084 153 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 AP002004.2-201ENST00000531656 154 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 AC013244.2-201ENST00000603396 103 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 MIR6078-201ENST00000611069 100 ntBASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SND1-IT1Q9HBX3 SNORD116-11-201ENST00000383882 92 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-780P-201ENST00000391030 104 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 RNA5SP482-201ENST00000391269 118 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 U8.16-201ENST00000391279 133 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 MTCYBP4-201ENST00000401524 249 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 CALM2P4-201ENST00000430810 426 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 MTND3P21-201ENST00000433774 331 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC010095.1-201ENST00000443543 144 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AL121579.1-201ENST00000555129 305 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 MIR3672-201ENST00000584290 82 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC080078.2-201ENST00000603766 501 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 AC005858.4-201ENST00000623191 700 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 MIR1321-201ENST00000637766 79 ntBASIC0.62□□□□□ -2.31
SND1-IT1Q9HBX3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-595P-201ENST00000363944 107 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 RNA5SP213-201ENST00000391031 106 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 RNU6-373P-201ENST00000411247 98 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 USP9YP16-201ENST00000430287 407 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 RPS4XP11-201ENST00000446897 772 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 USP9YP23-201ENST00000455085 407 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AL358944.1-201ENST00000528537 144 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 MIR3945-201ENST00000581853 98 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC091178.2-201ENST00000584401 117 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC211469.2-201ENST00000605461 205 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC100812.1-201ENST00000607622 580 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC004832.4-201ENST00000608952 331 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SND1-IT1Q9HBX3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.6□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms