Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SNORD116-15-201ENST00000384445 92 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 SNORD116-19-201ENST00000384729 92 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 MIR873-201ENST00000401120 77 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-57P-201ENST00000411348 103 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC006028.1-201ENST00000438379 402 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 RNU7-197P-201ENST00000458836 62 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC092991.1-201ENST00000477176 376 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 RPS27P26-201ENST00000494583 239 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 RN7SKP57-201ENST00000517248 293 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 MIR5195-201ENST00000583555 115 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 MIR4753-201ENST00000585119 83 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 YPEL5P2-201ENST00000605553 359 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AC012640.5-201ENST00000623897 319 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNA5SP295-201ENST00000362655 121 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-944P-201ENST00000364023 107 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 SNORA38.1-201ENST00000364172 131 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-215P-201ENST00000365169 102 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 MIR539-201ENST00000365690 78 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 MIR491-201ENST00000384877 84 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNA5SP354-201ENST00000391247 136 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 MIR1294-201ENST00000408503 142 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 AL353705.1-201ENST00000433468 480 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RN7SL863P-201ENST00000462370 296 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RN7SL807P-201ENST00000470923 297 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU2-56P-201ENST00000516826 190 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 SNORA70.24-201ENST00000517233 118 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 POLR3GP1-201ENST00000594073 261 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RPL17P51-201ENST00000605218 238 ntBASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A2Q9H9S3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 SNORA27.1-201ENST00000362604 124 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 RNU1-105P-201ENST00000363470 161 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 Y_RNA.273-201ENST00000364703 102 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 MIR29B2-201ENST00000385055 81 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 AL512604.1-201ENST00000404812 257 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 SNORD65B-201ENST00000459126 73 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 AC080013.2-201ENST00000460866 323 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 RPL23AP54-201ENST00000495129 419 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 ATP5EP1-201ENST00000510257 156 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 MIR5688-201ENST00000580619 83 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 TUG1_4.1-201ENST00000619464 181 ntBASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
SEC61A2Q9H9S3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-80P-201ENST00000384195 107 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 AL035461.1-201ENST00000421490 332 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 RPS27P1-201ENST00000450552 247 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 RPS26P55-201ENST00000471178 356 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 MRPS36P2-201ENST00000512569 299 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 MIR4474-201ENST00000579189 78 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 snoZ196.1-201ENST00000625269 89 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 AC009487.2-201ENST00000420969 6821 ntBASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A2Q9H9S3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 SNORD45.3-201ENST00000363836 72 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-1325P-201ENST00000364905 105 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-136P-201ENST00000384663 107 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 MIR1278-201ENST00000408753 81 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 RPL23AP58-201ENST00000440453 469 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 HSPE1P13-201ENST00000451143 297 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 RNA5SP112-201ENST00000515937 99 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms