Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-75P-201ENST00000347264 129 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-822P-201ENST00000362707 106 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-271P-201ENST00000363858 105 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-668P-201ENST00000364180 107 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-33P-201ENST00000364249 162 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-132P-201ENST00000383863 107 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA5A-201ENST00000384111 134 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR490-201ENST00000384865 128 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-101P-201ENST00000391171 127 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR548O-201ENST00000408583 114 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD111B-201ENST00000408587 80 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-447P-201ENST00000410293 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-355P-201ENST00000410427 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-791P-201ENST00000410467 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-860P-201ENST00000410860 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-785P-201ENST00000411324 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC069218.2-201ENST00000411665 344 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC098614.2-201ENST00000426040 255 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC027124.2-201ENST00000428249 105 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA71B-202ENST00000439232 272 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AL078601.1-201ENST00000444542 271 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AL133547.1-201ENST00000448546 220 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 snoU13.17-201ENST00000458802 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC104849.1-201ENST00000462623 405 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 VWA8P1-201ENST00000510889 176 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RN7SKP46-201ENST00000515942 234 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-95P-201ENST00000516357 160 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-128P-201ENST00000516704 160 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-840P-201ENST00000517275 65 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC018442.3-201ENST00000523025 183 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC008011.1-201ENST00000545989 227 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 CR383656.7-201ENST00000548164 174 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC107016.1-201ENST00000550463 337 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 U6.90-201ENST00000614007 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC131238.1-201ENST00000617135 328 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 U6.70-201ENST00000620287 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 AC021613.1-201ENST00000623880 111 ntBASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-3Q9BYR4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms