Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 SNORA40.14-201ENST00000516543 86 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 RNU6-1137P-201ENST00000517073 99 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 SNORA31.25-201ENST00000517242 134 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AL442163.3-201ENST00000554110 156 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AC125232.2-201ENST00000592457 143 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 AC104695.3-201ENST00000604052 296 ntBASIC2□□□□□ -2.09
RTP3Q9BQQ7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2□□□□□ -2.09
RTP3Q9BQQ7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTP3Q9BQQ7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2□□□□□ -2.09
RTP3Q9BQQ7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU6-545P-201ENST00000362681 104 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP361-201ENST00000362686 118 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.158-201ENST00000363651 101 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.424-201ENST00000384063 103 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU6-639P-201ENST00000384074 107 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU6-318P-201ENST00000384283 103 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 MIR329-1-201ENST00000385028 80 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 MIR1262-201ENST00000408276 93 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU6-1001P-201ENST00000411265 100 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 MTCO3P19-201ENST00000415864 321 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 AC112492.4-201ENST00000456549 352 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU6-475P-201ENST00000516073 104 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP490-201ENST00000517141 136 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 MZT1P2-201ENST00000604387 248 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 AC010999.1-201ENST00000611856 324 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 AL138825.1-201ENST00000618587 192 ntBASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RTP3Q9BQQ7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU6-661P-201ENST00000362409 107 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU1-62P-201ENST00000362599 164 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU6-727P-201ENST00000363592 107 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.179-201ENST00000363844 90 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 SNORD31B-201ENST00000364977 69 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 SNORD14.1-201ENST00000365609 90 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.422-201ENST00000384054 114 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 SNORA67.2-201ENST00000384300 149 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.527-201ENST00000384573 102 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 SRIP3-201ENST00000413200 219 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU6-344P-201ENST00000516635 111 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 RRN3P3-201ENST00000549207 578 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
RTP3Q9BQQ7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RNU6-450P-201ENST00000364654 107 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC117470.1-201ENST00000381974 330 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 Y_RNA.389-201ENST00000383924 113 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RNU6-793P-201ENST00000384233 104 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RNU6-1145P-201ENST00000384246 107 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 MIR606-201ENST00000384851 96 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RNU4-62P-201ENST00000410125 130 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AL137159.1-201ENST00000452808 512 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC091179.3-201ENST00000474761 144 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC040926.1-201ENST00000530195 238 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 MIR4680-201ENST00000580906 66 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC006504.6-201ENST00000590142 199 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 RPS29P30-201ENST00000600975 111 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 MTND5P35-201ENST00000557537 1720 ntBASIC1.97□□□□□ -2.09
RTP3Q9BQQ7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 Y_RNA.27-201ENST00000362540 103 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNU5F-3P-201ENST00000363767 117 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNU6-926P-201ENST00000384075 107 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNU6-823P-201ENST00000391042 103 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 SNORD12B-201ENST00000410433 91 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNA5SP504-201ENST00000410676 117 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 AL118496.2-201ENST00000448300 230 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 AC016925.1-201ENST00000458303 298 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 AC010469.2-201ENST00000496412 480 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RN7SKP49-201ENST00000516675 260 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
RTP3Q9BQQ7 RNU1-117P-201ENST00000517041 158 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms